Gene Rleg_2117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_2117 
Symbol 
ID8013140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp2110849 
End bp2111322 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content63% 
IMG OID644824703 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_002975933 
Protein GI241204837 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.357601 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00570601 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCGGTTC CCGGCATCGG CGTTTCGGCC CCTGATTTCA ACCTTCCCCG CGACGGCGGC 
GGCCGCGTTT CGCTGGCCGA ATTCCACGGC AAGCCGCTGG TGTTGTTCTT CTATCCCAAG
GACGACACGA CGGGCTGCAC CGCCGAATCG CTGGCTTTCA CCGCGTTAGC AGCCGAGTTC
GAAGCGGCGG GTGCTGCCGT CATCGGCATG TCACCCGATT CGGCCGCTTG CCATGACAAG
TTCATCAAGA AGCACCGTCT TTCGGTGGCG CTCGCCTCGG ACGAGGAAAA GACGACGCTG
CAGGCCTATG GCGTCTGGAA GGAAAAGAGC ATGTACGGCC GCAACTTCAT GGGCGTCGAG
CGTACCACTT TCCTGATCCG CCAGGACGGC ACGATCGCCA CCATCTGGCA GAAGGTGAAG
GTGCAGGGCC ATGCCGAAAC CGTGCTCGAG GCCGTGAGGA ACCTGGCAGC GTGA
 
Protein sequence
MAVPGIGVSA PDFNLPRDGG GRVSLAEFHG KPLVLFFYPK DDTTGCTAES LAFTALAAEF 
EAAGAAVIGM SPDSAACHDK FIKKHRLSVA LASDEEKTTL QAYGVWKEKS MYGRNFMGVE
RTTFLIRQDG TIATIWQKVK VQGHAETVLE AVRNLAA