Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_1970 |
Symbol | |
ID | 8013009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 1964671 |
End bp | 1970232 |
Gene Length | 5562 bp |
Protein Length | 1853 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644824558 |
Product | putative superfamily I DNA and RNA helicase protein |
Protein accession | YP_002975790 |
Protein GI | 241204694 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.525095 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGACA TGGCAGACGG CGCATCTGAG CAGAATGAAA CGTCCATCTT TCAAAGTAAT CTGTCCGTAG AAGCCAAGAT CGAAAAGGCC AGAACCGAAC TACTTGACCT TTCTGCGCGC AACCGCCTTT TGAACGTTCC CCGCTTTTCG AAAAGTGCGA AAACCATCGA CGTTGTCGAC GAGAAGTCGT CCGAAGTGTT TCGGATCCTT GTGACCGATG GAAGGACCAT GACTTTCCTG GCGGGGGCGA AGGGGCGGGA ATCCAAGGAT GACGGCGACG GTGACGAACT GATCGAACTC GCGCTCCCGG ACGATGATGA GCGCGACGGC GACGGTCGGC TTGTCCGTCA TGGCGACACC AAGCTCCAGA CCCGCATGAC GCCAAATGCT CTCCAGAAGC GTCTGCTGGA CCTTTACTTC GATGCCCGGA CATTAGAGGA AGAGCAGGGG GTGAATATCC TGTTCCTCGG GCTGGGCACT CTGAAGTGGA TCGATCCCAA CAATGCGGAG AACGTCCGCT ACGCACCGCT CATCCTCGTG CCGGTGTCGT TGGAGCGTGG CAGCGCAGCC GAGCGCTTCA AGCTTCGAGC GCGCCAGGAG GACCTCGCTT CAAACCTCTC CCTCGAGGCC TTTCTCGACC GTGTCCATCA GATCTCAATG CCGGCGTTCG AGGCGAGCGA CGACTTCACA TTCGAGGACT ACGCCGCGAA GGTGGCGGCG TGCATCTCGA TGAAGCCAAA CTGGTCCGTC CAACCCGACG ACATCGTGCT CGGTTTCTTC AGCTTCGCCA AATTCCTCAT GTACAGAGAC CTTGATCCCA CGCTCTGGCC TAAGGATGCC AAGTTCACCG AGCTGCCACT CATCATCGGT TTGGTTTCCG ATGGCTTCGA GGGCGGCGAA CAGCTGCTTG GCGAGGACGT CAAGATCGAC GAGCACATTT CGCCTTCCGA GATGACGCAT ATCGTCGATG CCGACAGTTC GCAGACGGCC GCGATCCACG AAGTCAGGCG AGGGAGGGAC CTCGTCATTC AAGGCCCGCC GGGCACGGGA AAATCCCAGA CAATCGCCAA CATTATCGCG TCGGCGGTCG CCGACGGCAA GACGGTGCTG TTCGTAGCCG AAAAGATGGC GGCGCTCGAG GTCGTGAAAC GACGCCTTGA CCAGGCGAGC GTCGGTGAAG CCTGCCTCGA ACTCCATAGT AACAAGGCGA ACAAGCGCGC CGTCCTCGCA GAGCTGCAGC ATACTTGGGA GCTCGGCACG CCCAAAGGGG AATCCGGCAG TGCGCTCGAC CAGCGCCTCA CGGACGCACG CGATTTACTT AACGCCCATC CGGCACGCAT TCACCGCGTG TATCAACCCT ACTCGCTTTC CCCGTTCCAA GTCATGGGAC ACCTTGCAAG GCTGCGTCGC GAGGGCATGG CTCCATCGGA TATCGATCTG CCGGTTGCTG CGGACTGGAC GCCGGAGGTG CGCGAGCGGG CGAAGGCGCT GCTGACGGAA CTTGCTGAAC GCATCGAGGA CATCGGCCTG CCAAAGCACC ATCCGTGGTA CGGCGTCGGG CTTACCGGAG TTACCCCGCT CGATCTTGAA CGTCTGACGA CGAGATTGAA AACGGCGGCC ACGGAACTGG CTGAATTGCG CAGCCAGATG GATGACGTAT CGCAGACGCT CGAACTATCA TCGCCTCACT CGCTGGCAAA CTTTATGGAC ATCGCGTCGA CCGCGGAAAG GGTCGCCTCG TGTCCTTCGG AGATATCTTC GGAGGCATTG GCAAACGACG CATGGGCGAC CGAACTGGAT CGGGTACGCG ATCTTGTCGT TGGCGGCGCC GAATTCTCGA CATACGCGGC CGAAGTCGCG GCCCGCATGA CGCCGTCCGC ATGGGAATCT GATCCGGAGC CGATTGCCAC GCAATTCGTC CGTCTTTCTG CAGACTTCTC ACAAAGCGGG TTTGCCACGA TCGAACAGCT TGCGTCTGTG CTGCCGCGCT TCCTGGCGGG CGCGGGCGCG TTGCGTACCC TGCTCGGCGT CAATGCTTCT CCGACCTTGG CATCGATTGA TCGGCTCATC GTCATCGGAC AGCGCGTAGC CGAAGCCCCG GACGCGAGCC CCGACGCCTT CGTTGCCGCC ATCTGGGAAC GAGGCCTTGA CCAGGCCTCC GATCTCGCTG AGGCCGTGGG AGACTTTCGG CGTATTCGTG CCGAGCTTGA AGGCAAGATC TCTGAGCAGG CCTGGGATAT CGACCTTATG CAGGTGCGGG CAGCGGTCGC CGTCCATGGC AAGCGTCTCT TCAGGTTCAT GAGCGGTGAG TGGCGCAAGG CAAAGGCGCT TCTGCGCAGC GTGATGCCCA ACGAGACTTC GCCCGACGAA ACTGTTCGAA TCCTTGATCT TCTCCAGAAG GGCAAGAGCG CCCGCGCTGC GATCAAGGAC GGCGACAGCC TCGGCAGATC TGCTTTCGGA GCGGACTGGC GCGGAGAAAA GTCGGACCCG AAGCCGCTTG AAAACCTCGT ACTTTGGATG CGAAGCCTGC GCGGTGTCGG TGTCGAAGCA CGGTTGATAG CCGGCCGTCT CTCCGACAGG ACGTCGGTAG CGGGCCGTTG TGAGCAGGTG AGGGCGCTGC TGGACGAGTC GCGACGTCTT CTGCTCAGTC TATGGAAGGA TCTTGGTGAG AAGGCGTCAG TTTTGTTTTC GGACGCTCCA GGCCCAGATG GCGTCTCGCT TACACAGACA TCGCAATTCG CCCGCGAAAT CGCCGATGCC CACAAGGTCT TCCTGACGCT GGTCCGCTCT GTTCCGGAAA CCAACGCACA CCGTCTTGCG CTATTGAAGC TGCTCGCATT GGCGCGCGGC CTGAAATCCA CGCTGGAGCG GCTGGACTCC CTCGGCCGGG CTTCCTTCGG TCCGCTTTGG AAGGGGACGG AGTCGGACTG GTCGCTGCTG TCTCGCACGA CTGAGTGGAT TTCACACAAC TCCGACATCC GCCTGCTAAG CTCGCGCGTA TCCGACCGCC CCGCGGTGGC TGTGAAAGCT CGCGATGCAT TGGCGAGAGG AGCGATCCTT CAACACGATC TCCAAGCTTT GCTCGGCTTC CTGAAGGCGG ATGTGTCGAT TGTGTTCGGC GCGCACGAAA TCGGACAGAC GGAGCTTGCG ACGGTCGCGC AAAAGCTCGC GAAATGGGTC GAGACCGAGG AGCACCTATC CAAATGGGCC GCCTATCGCG GAAGAGCGGA AGACGCTGCG AACGCCGGCG TCGGTCTTGT TGTTGAACGC CTCGAAGATG GGCGGGTGAA GCCGGATGAC GTCGTGCCAT ATGTGGAGAT GGCGATCTAC GAAGGGATCC TCAGACATCA GCATTCCGCC GACCCCGAAT TATCTCGTTT CGACGGCGAG GTGCACGGGC GACTCGTGAA CGAATTCGCG ACATTGGACC GGAGCAGAAT GGCGCTATCC CGTCTTGAGG TCGTCCGCGC TCACCACAAA CGAATTCCTG CCGTCAGTGG GATCGGTCCT GTCGGAGTCC TTAGGGGAGA GATGGCGCGC CGTCGCGGTC ACATGCCGAT CCGCCAGCTC ATGCAGCGCG CGTCCGTAGC GATACAGGCC CTTAAGCCAG TCTTCATGAT GAGCCCGCTT TCCATAGCAC AGTTCCTGCC GCCCGGTCTT CTGCGGTTCG ATCTCCTCGT CATGGACGAA GCCAGTCAAA TTCAGCCGGT AGACGCGTTG GGAGCGGTAG CCCGCGCTAA ACAGGTGGTC GTGGTTGGGG ACGAGCGTCA GTTGCCGCCG ACCCGTTTCT TCTCGAAAAT GACCTCCAGC ACGTCGGATG ACGACGACGC CCAGGACGGC GCTCAGGTGT CAGATATTGA AAGTATCCTG GGACTCTTTT CCGCCCGAGG CCTTCCGGAA AAGATGCTCC GATGGCACTA CCGAAGCCGC CATCAGTCTC TGATCGCGGT CTCAAACAGC CAGTTCTATG ATAACAAGCT CTTCATTGTA CCGAGTCCTT ATACGGCCGA GGCGGGCATG GGCCTCCGCT TTCAGCATGT GCCTGGCGGC GTCTTCGAGG ATGGCGTCAA CAAGGTAGAG GCTAAGGTCG TCGCCGAAGC GATCATACGG CATGCGCTTC AATCGCCGAG CCTGTCGCTC GGCGTCGCGG CATTCTCCAT CAAGCAGCGT CGAGAGATCC AGGACCAGTT GGAACTGCTG CGACGCCTCA ACCCAGAAAC CGAGGAGTTC TTCCACTCGC ATCCGAGCGA GCCTTTCTTC ATCAAGAACC TTGAAAACGT TCAGGGCGAC GAGCGCGACG TCATCCTCAT TTCCGTCGCC TATGCCAAGG GGCCAAGTGG CGCGCCAATG AGCATGCGCT TCGGGCCGTT GGGAGCCGAG GGAGGCGAAC GTCGTCTCAA TGTTCTTATC AGCCGCGCGA AGCGGCGCTG CGAGGTATAC GCTTCGATCA CCGACGAGGA CATCGATCTC GAACGTGGAA AAGGCAAAGG CGTCTTCGCA TTCAAACTGT TTCTCCATTA CGCTCGGACG GGCAGGCTTT CGATGACCCA GCGCACCGAC CGTGGGATGG ACAGCGTCTT TGAAGAACAG GTCATGGCTG CGCTTAAGGA GAGGGGCTAT CAGGTCCATC CGCAGGTTGG AATCGCCGGG TTCTTCATAG ATCTGGCGGT GGCCGACGAG CAGATACCGG GCAGATATAT TCTGGGGATC GAATGCGACG GCGCCGCATA CCATGACTCG CGTTCGGCTC GTGACCGAGA CCGGCTTCGA CAGGCGGTCC TCGAGGATCA TGGCTGGAAT ATCTATCGCA TCTGGAGTGC AGACTGGTTC CAAAGGCCCA AAGCGGAACT TGAACGCCTC GTTGCCGCCA TCGAGCGGGC CAAGGCCGAC GTCAGGTCGG GAACAGAGGA ACACCTGTCG AGGCGAGCGG TACCGGTCGA GGTCGTCACT ATCGAACGTG CGGACGTTAC AGAGATTGGT CTGCAGCCGG TTATCGTCGA CGAAATTTCG AGCGCAACCT TGTATCAGGA GGCCGTGCTG CGACCGAATA TCGTAGGCGA ACTTCACGAA GCGCCGATCG GCGTGGTGAT CGCGCTGGTA AAGCAAACGG TCGGAGCAGA AGGACCAGTG CATCAGGACG AGGTCGTCAC CCGCATCAGG TCGGCCTGGG GTCTTCAGCG GGCGGGAAAC CGGATCGATG CCCATGTCGG CGCGGCGATC ACGATCGCCC AGAATTCTCA GGAGATCGTG CGCGACGGAG AGTTTCTGCT TTGGCCGGAC AAGGACATCA CGCTCAGAGA TCGTAGCGGC GTCACGTCTC TCAGCCTGCG TCGGATCGAA ATGCTGCCGC CGATGGAAAT TGACGAAGGG CTTATCACAG TCATCAGAAC GAGCCTCGGG GCCACCGTAG ATCAGGCGGT GAATGCGGTC GCGCGCGGGC TTGGGTTCAA GTCAACGAGT AGTCAGTTAA AGGAACTGGT GGAGTCCCGG ATTGTGCTCT TGCAAGAGAA GGGTTCCTTG ATCGATTTCG GAGGCATGCT GACTGTTCTC AATCAAACCT GA
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Protein sequence | MIDMADGASE QNETSIFQSN LSVEAKIEKA RTELLDLSAR NRLLNVPRFS KSAKTIDVVD EKSSEVFRIL VTDGRTMTFL AGAKGRESKD DGDGDELIEL ALPDDDERDG DGRLVRHGDT KLQTRMTPNA LQKRLLDLYF DARTLEEEQG VNILFLGLGT LKWIDPNNAE NVRYAPLILV PVSLERGSAA ERFKLRARQE DLASNLSLEA FLDRVHQISM PAFEASDDFT FEDYAAKVAA CISMKPNWSV QPDDIVLGFF SFAKFLMYRD LDPTLWPKDA KFTELPLIIG LVSDGFEGGE QLLGEDVKID EHISPSEMTH IVDADSSQTA AIHEVRRGRD LVIQGPPGTG KSQTIANIIA SAVADGKTVL FVAEKMAALE VVKRRLDQAS VGEACLELHS NKANKRAVLA ELQHTWELGT PKGESGSALD QRLTDARDLL NAHPARIHRV YQPYSLSPFQ VMGHLARLRR EGMAPSDIDL PVAADWTPEV RERAKALLTE LAERIEDIGL PKHHPWYGVG LTGVTPLDLE RLTTRLKTAA TELAELRSQM DDVSQTLELS SPHSLANFMD IASTAERVAS CPSEISSEAL ANDAWATELD RVRDLVVGGA EFSTYAAEVA ARMTPSAWES DPEPIATQFV RLSADFSQSG FATIEQLASV LPRFLAGAGA LRTLLGVNAS PTLASIDRLI VIGQRVAEAP DASPDAFVAA IWERGLDQAS DLAEAVGDFR RIRAELEGKI SEQAWDIDLM QVRAAVAVHG KRLFRFMSGE WRKAKALLRS VMPNETSPDE TVRILDLLQK GKSARAAIKD GDSLGRSAFG ADWRGEKSDP KPLENLVLWM RSLRGVGVEA RLIAGRLSDR TSVAGRCEQV RALLDESRRL LLSLWKDLGE KASVLFSDAP GPDGVSLTQT SQFAREIADA HKVFLTLVRS VPETNAHRLA LLKLLALARG LKSTLERLDS LGRASFGPLW KGTESDWSLL SRTTEWISHN SDIRLLSSRV SDRPAVAVKA RDALARGAIL QHDLQALLGF LKADVSIVFG AHEIGQTELA TVAQKLAKWV ETEEHLSKWA AYRGRAEDAA NAGVGLVVER LEDGRVKPDD VVPYVEMAIY EGILRHQHSA DPELSRFDGE VHGRLVNEFA TLDRSRMALS RLEVVRAHHK RIPAVSGIGP VGVLRGEMAR RRGHMPIRQL MQRASVAIQA LKPVFMMSPL SIAQFLPPGL LRFDLLVMDE ASQIQPVDAL GAVARAKQVV VVGDERQLPP TRFFSKMTSS TSDDDDAQDG AQVSDIESIL GLFSARGLPE KMLRWHYRSR HQSLIAVSNS QFYDNKLFIV PSPYTAEAGM GLRFQHVPGG VFEDGVNKVE AKVVAEAIIR HALQSPSLSL GVAAFSIKQR REIQDQLELL RRLNPETEEF FHSHPSEPFF IKNLENVQGD ERDVILISVA YAKGPSGAPM SMRFGPLGAE GGERRLNVLI SRAKRRCEVY ASITDEDIDL ERGKGKGVFA FKLFLHYART GRLSMTQRTD RGMDSVFEEQ VMAALKERGY QVHPQVGIAG FFIDLAVADE QIPGRYILGI ECDGAAYHDS RSARDRDRLR QAVLEDHGWN IYRIWSADWF QRPKAELERL VAAIERAKAD VRSGTEEHLS RRAVPVEVVT IERADVTEIG LQPVIVDEIS SATLYQEAVL RPNIVGELHE APIGVVIALV KQTVGAEGPV HQDEVVTRIR SAWGLQRAGN RIDAHVGAAI TIAQNSQEIV RDGEFLLWPD KDITLRDRSG VTSLSLRRIE MLPPMEIDEG LITVIRTSLG ATVDQAVNAV ARGLGFKSTS SQLKELVESR IVLLQEKGSL IDFGGMLTVL NQT
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