Gene Rleg_1965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_1965 
Symbol 
ID8013004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp1959002 
End bp1960027 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content60% 
IMG OID644824554 
Productinner-membrane translocator 
Protein accessionYP_002975786 
Protein GI241204690 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.389843 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAAA AAGATCTCGG ACTGCTGCTT TTGATCGTCG TCGTCGGCAT CGTCGTCGCC 
ATCATCAACC CGCGCTTCCT CCTACCGATC AACCTGGCCA ACACCGCCAA CTTGATCGGC
CTGTTCGGCA TCCTGTCGAT CGGCCAGGCC TTTGTCATCA TTACAGGCGG TATCGAGCTT
TCCGTGGGCT CGCTCGTTGC GCTTCTCGGT GTGCTGTTCG TCGATTTCAT CGCGGTCCAG
GATATGTCAT GGATGCTGGC GCTGCCGTTC ATTCTCGCAC TCGGCGCGGT CATAGGCGCC
GTCCACGGCT GGCTGATCAC CCGGCTCAAC CTGCAGCCCT TCGTCGTCAC CCTCTGCGGC
CTCCTGATTT ATCGTGGGGC AGCGCGCTTC TACACGGCCG ACGGAACGGC GGGCTTTGCT
TTCGGCCAAA ATTTCCCAGA CCTCGAATTC CTGACCGCCG GACGGTTTTA CGGCGTTCCC
AACACCTTCA TCGCACTCGT CATCATTGCC GTGGTCATGT GGATCATGCT GCATCGCTCT
GTCTTCGGGC GTTATCTTTA CGCGATCGGG AAGAACGAGG AGGCAGCCCG CTATTCCGGT
ATCCGTACCG GCCGCATGAT CATGTCGGCC TATGTCATCT GCGGGCTGCT GACGGCGCTT
TCGGCGATTT ATTTCGCCAT GTACACGCGC TCGATCTCGC CGGCGAGCCA TGGCCAGTTC
TACGAACTCT ACGCGATTGC CGCTGCCGTA CTCGGCGGCT TTTCGCTCCG CGGCGGCGAG
GGGTCGATCG TCGGCGTCGT GCTGGGGACG GTCCTGCTCC AGGAGTTGCA GAATCTCGTC
AACCTACTTG GTATTCCCTC GTCGTTGAAT TTCGCTGTCA TGGGTGGCGT CATCCTCATC
GGCGTCCTGA TCGACCAACA ATGGCACGCG ATCCGCGCAA AGCGCCGCCT CGTCTTTGCC
GCCCGGCAGA CCGAAACCCG TCTTTCGAAC GAAGGCAGTT TGCCAGTGGT TGCCAATCAG
GACTAG
 
Protein sequence
MIKKDLGLLL LIVVVGIVVA IINPRFLLPI NLANTANLIG LFGILSIGQA FVIITGGIEL 
SVGSLVALLG VLFVDFIAVQ DMSWMLALPF ILALGAVIGA VHGWLITRLN LQPFVVTLCG
LLIYRGAARF YTADGTAGFA FGQNFPDLEF LTAGRFYGVP NTFIALVIIA VVMWIMLHRS
VFGRYLYAIG KNEEAARYSG IRTGRMIMSA YVICGLLTAL SAIYFAMYTR SISPASHGQF
YELYAIAAAV LGGFSLRGGE GSIVGVVLGT VLLQELQNLV NLLGIPSSLN FAVMGGVILI
GVLIDQQWHA IRAKRRLVFA ARQTETRLSN EGSLPVVANQ D