Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_1965 |
Symbol | |
ID | 8013004 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 1959002 |
End bp | 1960027 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644824554 |
Product | inner-membrane translocator |
Protein accession | YP_002975786 |
Protein GI | 241204690 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.389843 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCAAAA AAGATCTCGG ACTGCTGCTT TTGATCGTCG TCGTCGGCAT CGTCGTCGCC ATCATCAACC CGCGCTTCCT CCTACCGATC AACCTGGCCA ACACCGCCAA CTTGATCGGC CTGTTCGGCA TCCTGTCGAT CGGCCAGGCC TTTGTCATCA TTACAGGCGG TATCGAGCTT TCCGTGGGCT CGCTCGTTGC GCTTCTCGGT GTGCTGTTCG TCGATTTCAT CGCGGTCCAG GATATGTCAT GGATGCTGGC GCTGCCGTTC ATTCTCGCAC TCGGCGCGGT CATAGGCGCC GTCCACGGCT GGCTGATCAC CCGGCTCAAC CTGCAGCCCT TCGTCGTCAC CCTCTGCGGC CTCCTGATTT ATCGTGGGGC AGCGCGCTTC TACACGGCCG ACGGAACGGC GGGCTTTGCT TTCGGCCAAA ATTTCCCAGA CCTCGAATTC CTGACCGCCG GACGGTTTTA CGGCGTTCCC AACACCTTCA TCGCACTCGT CATCATTGCC GTGGTCATGT GGATCATGCT GCATCGCTCT GTCTTCGGGC GTTATCTTTA CGCGATCGGG AAGAACGAGG AGGCAGCCCG CTATTCCGGT ATCCGTACCG GCCGCATGAT CATGTCGGCC TATGTCATCT GCGGGCTGCT GACGGCGCTT TCGGCGATTT ATTTCGCCAT GTACACGCGC TCGATCTCGC CGGCGAGCCA TGGCCAGTTC TACGAACTCT ACGCGATTGC CGCTGCCGTA CTCGGCGGCT TTTCGCTCCG CGGCGGCGAG GGGTCGATCG TCGGCGTCGT GCTGGGGACG GTCCTGCTCC AGGAGTTGCA GAATCTCGTC AACCTACTTG GTATTCCCTC GTCGTTGAAT TTCGCTGTCA TGGGTGGCGT CATCCTCATC GGCGTCCTGA TCGACCAACA ATGGCACGCG ATCCGCGCAA AGCGCCGCCT CGTCTTTGCC GCCCGGCAGA CCGAAACCCG TCTTTCGAAC GAAGGCAGTT TGCCAGTGGT TGCCAATCAG GACTAG
|
Protein sequence | MIKKDLGLLL LIVVVGIVVA IINPRFLLPI NLANTANLIG LFGILSIGQA FVIITGGIEL SVGSLVALLG VLFVDFIAVQ DMSWMLALPF ILALGAVIGA VHGWLITRLN LQPFVVTLCG LLIYRGAARF YTADGTAGFA FGQNFPDLEF LTAGRFYGVP NTFIALVIIA VVMWIMLHRS VFGRYLYAIG KNEEAARYSG IRTGRMIMSA YVICGLLTAL SAIYFAMYTR SISPASHGQF YELYAIAAAV LGGFSLRGGE GSIVGVVLGT VLLQELQNLV NLLGIPSSLN FAVMGGVILI GVLIDQQWHA IRAKRRLVFA ARQTETRLSN EGSLPVVANQ D
|
| |