| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_1875 |
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| Symbol | |
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| ID | 8012927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | - |
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| Start bp | 1859980 |
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| End bp | 1860903 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644824464 |
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| Product | 5-dehydro-4-deoxyglucarate dehydratase |
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| Protein accession | YP_002975696 |
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| Protein GI | 241204600 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR03249] 5-dehydro-4-deoxyglucarate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.207996 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.131652 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACCCGA TTGAATTGAA GAAGGCCGTC GGTAGTGGTC TCCTGTCGTT TCCGGTTACG
CACTTCGACG ATCAACTGAA ATTTGACGAA GCGAAGTACA GCCGCCATGT CGAGTGGCTT
GCAGGTTATG ACGCCGCTGC ACTGTTTGCC GCCGGCGGCA CCGGTGAATT CTTCTCGCTT
AATCCGGCCG AGATTCCGCA GGTGATCCGG GCCGCCAAGG CGTCGGCCGG CAAGACGCCG
ATCATTTCGG GAACCGGCTA CGGCACGTCG CTCGCAATCG AGATCGCAGT CGCGGCCGAG
AAGGCCGGCG CCGACGGACT GCTGCTGCTG CCGCCCTATC TGATGTTTGC CGAACAGGCG
GGTCTCATCG CCCACGTCAA GGCGGTCTGC CAATCGGTCG GCATCGGCGT CATCGTCTAT
AACCGCGACA ACGCCGTCCT GACCGCCGAC AGCATCGCGC GCCTGGCGGA GGAATGCCCG
AACCTGATCG GCTTCAAGGA CGGCGTCGGC GATGTCGACA AGGTGATCGA GATTACCACC
CTGCTTGGCG ATCGTCTCGT CTATGTCGGC GGCATGCCGA CCCACGAGGT TTATGCCCAG
GCCTATTTTG CCGCAGGCGT GACGACCTAT TCATCGGCCG TGTTCAACTT CGTACCAGCG
CTTGCCCAGC GCTTTTACGG CGCCTTGCGC ACCGGCGATC AGGCGACCGT CGATGAGATC
TTGAAGGGCT TCTTCTTCCC CTTCGTCGCC TTGCGCAATC GCAAGAAGGG ATATGCCGTC
TCGATCATCA AAGCCGGCCT TCGCGTCCTC GGGCAGAACC CAGGCCCCGT GCGCCCGCCT
CTGACGGATC TTTCCCAGGA TGAGCTCGCG CTGCTGGAAA AGATCGTCCA GGCCAACGGC
GTCACACGGA TCGCGGCGGA ATAA
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| Protein sequence | MNPIELKKAV GSGLLSFPVT HFDDQLKFDE AKYSRHVEWL AGYDAAALFA AGGTGEFFSL
NPAEIPQVIR AAKASAGKTP IISGTGYGTS LAIEIAVAAE KAGADGLLLL PPYLMFAEQA
GLIAHVKAVC QSVGIGVIVY NRDNAVLTAD SIARLAEECP NLIGFKDGVG DVDKVIEITT
LLGDRLVYVG GMPTHEVYAQ AYFAAGVTTY SSAVFNFVPA LAQRFYGALR TGDQATVDEI
LKGFFFPFVA LRNRKKGYAV SIIKAGLRVL GQNPGPVRPP LTDLSQDELA LLEKIVQANG
VTRIAAE
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