Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_1791 |
Symbol | |
ID | 8015602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 1784844 |
End bp | 1785563 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644824382 |
Product | LexA repressor |
Protein accession | YP_002975615 |
Protein GI | 241204519 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
TIGRFAM ID | [TIGR00498] SOS regulatory protein LexA |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.117655 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00108094 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTCACGC GCAAACAACA GGAGCTTCTC CTTTTCATTC ATGAGCGCAT GAAGGAATCC GGCGTTCCGC CATCTTTCGA CGAAATGAAG GATGCTCTGG ACCTCGCCTC GAAGTCCGGG ATTCATCGCC TGATTACGGC GCTCGAGGAG AGAGGCTTCA TTCGCCGCCT ACCGAACCGC GCCCGTGCGC TCGAGGTCAT CAAGCTTCCG GAGGCCTACA GCCCCAGCAT CCAGCCGCGG CGCGGCTTTT CGCCGAGCGT CATCGAAGGC AGCCTGGGCA AACCTCAGCC GGTCGCCGCC CCTGCTCCCG CAAAACCCGT CGCCGACAAC GGCAACTCGG TTTCCGTGCC GGTCATGGGC AGAATCGCCG CCGGTGTGCC GATCTCGGCG ATCCAGAACA ACACCCACGA CATCGCCGTT CCGGCCGACA TGCTCGGTTC CGGTGAACAT TATGCCCTGG AGGTCAAGGG CGATTCGATG ATCGACGCCG GCATCTTCGA CGGCGACACC GTGATCATCC GCAATGGCAG CACCGCAAGT CCTGGCGACA TTGTTGTTGC ACTCGTCGAT GACGAAGAAG CGACACTCAA GCGCTTCCGC CGCAAGGGCG CCTCGATCGC ACTGGAAGCG GCCAACCCGG CTTACGAGAC CCGGATTTTC GGACCAGACC GTGTTAAGGT GCAGGGCAAA CTCGTCGGCC TCATTCGCCG CTATCACTGA
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Protein sequence | MLTRKQQELL LFIHERMKES GVPPSFDEMK DALDLASKSG IHRLITALEE RGFIRRLPNR ARALEVIKLP EAYSPSIQPR RGFSPSVIEG SLGKPQPVAA PAPAKPVADN GNSVSVPVMG RIAAGVPISA IQNNTHDIAV PADMLGSGEH YALEVKGDSM IDAGIFDGDT VIIRNGSTAS PGDIVVALVD DEEATLKRFR RKGASIALEA ANPAYETRIF GPDRVKVQGK LVGLIRRYH
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