| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_1769 |
|---|
| Symbol | |
|---|
| ID | 8012831 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | + |
|---|
| Start bp | 1760333 |
|---|
| End bp | 1762825 |
|---|
| Gene Length | 2493 bp |
|---|
| Protein Length | 830 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644824360 |
|---|
| Product | ATP-dependent Clp protease, ATP-binding subunit clpA |
|---|
| Protein accession | YP_002975593 |
|---|
| Protein GI | 241204497 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
|---|
| TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0732353 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCAACAT TTTCGCCTAG TTTAGAGAAG GCGCTCCATC AGGCACTGAC CTTTGCCAAC
GAGCGGCACC ACGAATATGC GACGCTCGAG CATCTGCTGC TCGCCCTGAT CGACGATGCC
GATGCGGCCG CGGTCATGGG TGCCTGCAAT GTCGATCTCG ACGCGCTGCG CAAGACGCTC
GTCGAATATG TCGACAACGA ACTTTCCAAC CTGATCACCG GTTATGACGA GGATTCGAAG
CCGACCTCCG GCTTCCAGCG CGTCATCCAG CGTGCCGTCA TCCACGTGCA ATCGTCCGGC
CGCGAAGAGG TGACCGGCGC CAACGTGCTC GTCGCGATCT TCGCCGAGCG CGAGAGCCAT
GCCGCCTATT TCCTGCAGGA GCAGGAAATG ACCCGCTACG ACGCCGTCAA CTATATCTCC
CACGGCATCG GCAAGCGGCC GGGCGCTTCG GATGTGCGTC CCCCGCGCGG TGCTGAGGAC
GAAGCCGAAA GCAGCAAGCC GACGGCGCGC GGCGGCGAGG AAGAAGGCGG CCCCAAGAAG
CAGCAGGATG CGCTCAAGGC CTATTGCGTC AATCTCAACG AGAAGGCCAA GGGCGGCAAG
ATCGATCCGC TGATCGGCCG TCACGCCGAG GTCAGCCGCA CGATCCAGAT CCTGTGCCGC
CGTTCGAAGA ACAATCCGCT CTATGTCGGT GATCCCGGCG TCGGCAAGAC GGCGATCGCC
GAAGGCCTTG CCAAGCGCAT CGTCGAAGGC AAGGTTCCCG AAGCGCTCGC CGATGCGACG
ATCTTCTCGC TCGACATGGG CACGCTGCTC GCCGGCACGC GCTATCGCGG CGACTTCGAG
GAGCGCCTGA AGCAGGTCGT CAAGGAACTG GAAGAATATC CGGGCGCCGT GCTCTTCATC
GACGAGATCC ACACGGTGAT CGGCGCCGGC GCCACCTCGG GCGGCGCGAT GGATGCATCG
AACCTCCTGA AGCCGGCCCT GTCATCGGGC GCGATTCGCT GCATCGGTTC GACCACCTAC
AAGGAATACC GCCAGTTCTT CGAGAAGGAC CGGGCGCTGG TCCGTCGCTT CCAGAAGATC
GACGTCAGCG AGCCGTCGAT CGAGGATGCG ATCGAGATCA TGAAGGGCCT GAAGCCCTAT
TTCGAAGAGT ATCACCACCT GCGTTATTCG AACGACGCCA TCAAGTCGGC CGTCGAATTG
TCGGCCCGCT ACATCTCCGA CCGCAAGCTG CCCGACAAGG CGATCGACGT GATCGACGAA
ACCGGTGCGG CCCAGATGCT GCTGCCGCCG TCCAAGCGCC GCAAGCTGAT CACCGAAAAG
GAGATCGAGG CAACGGTCGC CACGATGGCG CGCATTCCGC CGAAGACCGT CTCCAAGGAC
GACGAAGCCG TGCTCGCCAA TCTCGAGCAG GAACTGCGTT CGGTGGTCTA CGGCCAGGAC
ATAGCCATCG AAGCCCTTTC GACCTCGATC AAGCTGGCGC GTGCGGGTCT TCGCGAGCCG
AACAAGCCGA TCGGCGCCTA TGTCTTCTCC GGTCCGACCG GCGTCGGCAA GACCGAGGTG
GCAAAGCAGC TGGCATCGTC GCTCGGCGTC GAACTGCTGC GCTTCGACAT GTCGGAGTAT
ATGGAGCGGC ACACGGTTTC GCGTCTGCTC GGCGCACCTC CCGGCTATGT CGGCTTCGAC
CAGGGCGGTC TTCTGACTGA TGGCGTCGAC CAGCACCCGC ATTGCGTGGT CCTGCTCGAC
GAAATCGAGA AGGCGCATCC CGACATCTAC AATATCCTGC TGCAGGTCAT GGACCACGGC
ACGCTGACCG ACCACAACGG CAAGAAGATC GACTTCCGCA ACGTCATCCT GATCATGACG
ACCAATGCGG GTGCGTCGGA AATGGCCAAG GCGGCGATCG GCTTCGGCTC GTCCAAACGC
ACCGGCGAGG ACGAGGAGGC GCTGACCCGC CTGTTCACGC CGGAATTCCG CAACCGTCTC
GACGCGATCA TTCCTTTCGC GGCGTTGCCG ACGGCCGTCA TCCACAAGGT CGTGCAGAAG
TTCATCATGC AGCTGGAGGC CCAGCTTTCC GAAAGGAACG TCACCTTCGA CCTGCACGAG
GATGCAATCG CCTGGCTGGC GGAAAAGGGT TACGACGAGA AGATGGGCGC CCGCCCGCTT
GCTCGCGTCA TTCAGGATAC GATCAAGAAG CCGCTCGCCA ACGAAATCCT CTTCGGCAAG
CTGAAGAAGG GCGGCGTCGT CAACGTCACT GTCGGCCCGA AGGAAGACGG CAAGCCCGGC
ATCGTGCTCG AAGCCATTTC GGAAACGGCG CCGATCAAGC CGAAGCCCGA AGCCGAGGTC
GTGCATCCCG AAGGCGATGA TGGGGATGAC GGCGAGCTGA AGACGAAGGC GGCCCGCAAG
ACCCGCGCCA AAGCAGTGCC GCAGGCCGAG CCTGAGGTTC GCGACGCCCC GAAGAAGGGA
AGCGCGGTTC CGAAGGTTCC ACGCAAGAAG TAA
|
|---|
| Protein sequence | MPTFSPSLEK ALHQALTFAN ERHHEYATLE HLLLALIDDA DAAAVMGACN VDLDALRKTL
VEYVDNELSN LITGYDEDSK PTSGFQRVIQ RAVIHVQSSG REEVTGANVL VAIFAERESH
AAYFLQEQEM TRYDAVNYIS HGIGKRPGAS DVRPPRGAED EAESSKPTAR GGEEEGGPKK
QQDALKAYCV NLNEKAKGGK IDPLIGRHAE VSRTIQILCR RSKNNPLYVG DPGVGKTAIA
EGLAKRIVEG KVPEALADAT IFSLDMGTLL AGTRYRGDFE ERLKQVVKEL EEYPGAVLFI
DEIHTVIGAG ATSGGAMDAS NLLKPALSSG AIRCIGSTTY KEYRQFFEKD RALVRRFQKI
DVSEPSIEDA IEIMKGLKPY FEEYHHLRYS NDAIKSAVEL SARYISDRKL PDKAIDVIDE
TGAAQMLLPP SKRRKLITEK EIEATVATMA RIPPKTVSKD DEAVLANLEQ ELRSVVYGQD
IAIEALSTSI KLARAGLREP NKPIGAYVFS GPTGVGKTEV AKQLASSLGV ELLRFDMSEY
MERHTVSRLL GAPPGYVGFD QGGLLTDGVD QHPHCVVLLD EIEKAHPDIY NILLQVMDHG
TLTDHNGKKI DFRNVILIMT TNAGASEMAK AAIGFGSSKR TGEDEEALTR LFTPEFRNRL
DAIIPFAALP TAVIHKVVQK FIMQLEAQLS ERNVTFDLHE DAIAWLAEKG YDEKMGARPL
ARVIQDTIKK PLANEILFGK LKKGGVVNVT VGPKEDGKPG IVLEAISETA PIKPKPEAEV
VHPEGDDGDD GELKTKAARK TRAKAVPQAE PEVRDAPKKG SAVPKVPRKK
|
|---|
| |