| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_1649 |
|---|
| Symbol | |
|---|
| ID | 8012718 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | - |
|---|
| Start bp | 1641491 |
|---|
| End bp | 1642531 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644824234 |
|---|
| Product | extracellular solute-binding protein family 1 |
|---|
| Protein accession | YP_002975475 |
|---|
| Protein GI | 241204379 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.316325 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGCCA GACGTTTTGC CCAAATCCTG TCTCTTGCGC TGCTTGCCGC CGTCGGCAAC
ACCGCCGCGG CCCATGCGCA ATCGAAGACG CTGACCATCT CCTGGTGGGG CTATAACGGC
GAGAAGATGA ATGCGAACAT CATCACGCCC TTCAAGAAGA TCTGCGGCTG CGAGATCGTG
TTCGAAACCG GCAACAATGC CGACCGGCTC AACAAGCTGA AATTGCGCGA TGGCAAGGGC
GTCGATGTCA TCTATCTCAC CGACAGTTTC TCGCAGCTCG GCATCGAACA GGGACTGTTC
CAGGAGATCG ATGCGTCGAA GATCCCGAAC CTTGCGGATA TCTACGAACT GGGCAAGGCG
CCTCAGGGCA AATACGGCCC GGCCTATACG ATCGGACGCG TCGGCATCGT CTATGACTCC
GCCAAGGTCA ACCCACCGAT CACCGCCTGG GGCGACCTGT GGCGCGACGA TCTGAAGAGC
TCCGTCTCCC TGCCCGGCAT CACCACCACG GCCGGCCCAC TGGTCGTTCT GGAAGCCGGC
AAGCATGGTG GCGCCGATGC CTATGAAGAC ACCGACAAGG CCTTCTCGGA AATCGAGGCG
CTGAAGCCCA ATGTCGTCAA GAACTACAAC ACCGGCTCGG AGCTGGTGAA CCTGATATCA
ACAGGCGAAG TGCGCGTTGC GCTGGCCCAG GACTTTACCC TGGCATCGAT GCAGGCGGCC
GTTCCGACGA TGACGTGGGC CAAGCTCAAG GACGGCGATA TCGCCACGCT GAACACCGTG
AACATCCCGA AGGGTTCGGA AAATGTCGAA CTCGCCCATC AGTTCATCAA CTTCATCCTG
TCAAAGGACG TCCAGCAGGC CGAAGCCGAA CAAGGCGTCG ATGCGCCGAT CTCGACAAAG
GTCAGCCTGA CGCCGGACCA GGCGAAGATC TGGACCTATG GCCCGGATAT GGTCGCGAGC
CTTACCCGAA TCGACTATGC CAAGATGAAC GCTGCCAAGG CCGACTGGAT CGATCGCTGG
AACGAAGTCT TCGGTCAGTA A
|
|---|
| Protein sequence | MKARRFAQIL SLALLAAVGN TAAAHAQSKT LTISWWGYNG EKMNANIITP FKKICGCEIV
FETGNNADRL NKLKLRDGKG VDVIYLTDSF SQLGIEQGLF QEIDASKIPN LADIYELGKA
PQGKYGPAYT IGRVGIVYDS AKVNPPITAW GDLWRDDLKS SVSLPGITTT AGPLVVLEAG
KHGGADAYED TDKAFSEIEA LKPNVVKNYN TGSELVNLIS TGEVRVALAQ DFTLASMQAA
VPTMTWAKLK DGDIATLNTV NIPKGSENVE LAHQFINFIL SKDVQQAEAE QGVDAPISTK
VSLTPDQAKI WTYGPDMVAS LTRIDYAKMN AAKADWIDRW NEVFGQ
|
|---|
| |