| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_1619 |
|---|
| Symbol | |
|---|
| ID | 8012691 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | + |
|---|
| Start bp | 1607681 |
|---|
| End bp | 1608514 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644824205 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_002975446 |
|---|
| Protein GI | 241204350 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.44916 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGACT TCATTGCCCA TCCCGAACAT GGAATCGTCT GGATTTCGGG CGCGAGCTCA
GGCATCGGCC GGGCGCTTGC ACTGAGGCTC GTCGGCGAAG GATACAAGGT CGCCGTCACG
GCCAGAAGCC ACGAAAAGCT TGTCGAACTG CAAGCCGAAG CCAATGGCCT CTCGGGCAGT
ATCATTGTGC TCGACGGCGA CGTCACCGAT GCCGAGGACA TGGAACATGT CATGGCCTCC
ATCGAATATG AGCACGGCAC GCTCGCCATG GCGATCCTCA ATGCCGGCGT CTACCTGCCT
GTCCATGCCG AGGATCTGAA TCGCACCGAT TTCGAGAAGA GCTTTGCCGT CAACCTCTCC
GGCGTCGTCA ACTGTCTGCT GCCGGCGATC CGCCATATGA AGGCGAAGGG GCAGGGACAA
ATTGCCATCG TTTCCTCCGT CACCGGTTAT GGCGGCCTGC CGACGGGGGC TGCCTATGGT
GCTACCAAGG CGGCGCTGAT CAATATGGCC GAAAGCCTGA AATTCGATCT CGACAAGATG
GGCATCCGCA TCCAGCTCGT CTGCCCGGGC TTTGTCGATA CGCCGGCAAC GAGGAAGAAT
GCCTTTCCGA TGCCGTCGCT GGTATCGGTC GAGGAGGCCG CCCGGGAGAT TGCCGCCGGG
TTGAAATCGC AGGCCTTCGA GATCACGTTT CCGAAGCGCT TCACCACCAT GCTGAAGCTC
GCGCGCTTGC TCCCCTACAG CGCTTATTTC ACGCTGGTGA ACCGCGTGAC CGGCTGGCGG
GAGCGACCGC CATCGGCTGG TCGCCACCCG GTGACACCGC ATGCGGCGGA ATGA
|
|---|
| Protein sequence | MRDFIAHPEH GIVWISGASS GIGRALALRL VGEGYKVAVT ARSHEKLVEL QAEANGLSGS
IIVLDGDVTD AEDMEHVMAS IEYEHGTLAM AILNAGVYLP VHAEDLNRTD FEKSFAVNLS
GVVNCLLPAI RHMKAKGQGQ IAIVSSVTGY GGLPTGAAYG ATKAALINMA ESLKFDLDKM
GIRIQLVCPG FVDTPATRKN AFPMPSLVSV EEAAREIAAG LKSQAFEITF PKRFTTMLKL
ARLLPYSAYF TLVNRVTGWR ERPPSAGRHP VTPHAAE
|
|---|
| |