| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_1560 |
|---|
| Symbol | |
|---|
| ID | 8012638 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | + |
|---|
| Start bp | 1539980 |
|---|
| End bp | 1540735 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644824146 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_002975388 |
|---|
| Protein GI | 241204292 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.0320878 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAACA CTCTCAATGG AAAAGTCGCG CTTGTGACGG GTGGCTCTCG AGGTCTGGGC
GCCGCCGTGG CCCTCGCTCT CGCCGACGAG GGCGCCGACG TCGCGATCAC CTACGAGAAA
TCGAGAGACC GGGCAGAAGG CGTTGTGGCG CAGATCGAAC AGCGCGGCCG CCGTGCTGTG
GCGATCCAGT CGGACCAGGG CGACCCATCA CAAGCGGAAC CTCTCATAGC TAACGTGGTC
GAACGTCTCG GCAAATTGGA CATCCTCGTG AACAATGCCG CGGTGGCGTG GCAGGGTCGG
AAAATCGACG ATCCGGAGAT CGACAACTCC GCTATGGACC GGCAATGGGC GATAAACGTG
TCTGGCGTCG TCGCAAACAT CAGAGCGGCA TCCAGAGTTC TTCCCGAGGG CGGGCGGATC
ATCTCGGTCG GCTCCGGCGT CGGCACCCGC GCGGGCTTCC CTGGAACCGC GGACTATGCG
GGCACCAAGG CTGCCTTGAT CGGCTATTCA AAAGGGGTCG CCCGCGATCT CGGGCCGCGA
AAGATTACTG TCAACGTGGT TCAGGCGGGG ATCATGGCGA CCGACATGTT AGCCGGATCG
GAAGACAAGC TGCCAGCGGG GATCCTGGAT CTTCATGCCC TTGGACGGAT CGCCACCGTA
GAGGAAGTGG CCGCCGGCAT TATCTTCCTT GCAAGCCCGT CGGCGAGCTA CGTCACGGGT
TCGGTTCTGG ACGTCAACGG CGGATACCTC GCTTAA
|
|---|
| Protein sequence | MSNTLNGKVA LVTGGSRGLG AAVALALADE GADVAITYEK SRDRAEGVVA QIEQRGRRAV
AIQSDQGDPS QAEPLIANVV ERLGKLDILV NNAAVAWQGR KIDDPEIDNS AMDRQWAINV
SGVVANIRAA SRVLPEGGRI ISVGSGVGTR AGFPGTADYA GTKAALIGYS KGVARDLGPR
KITVNVVQAG IMATDMLAGS EDKLPAGILD LHALGRIATV EEVAAGIIFL ASPSASYVTG
SVLDVNGGYL A
|
|---|
| |