| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_1556 |
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| Symbol | |
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| ID | 8012635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | - |
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| Start bp | 1534846 |
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| End bp | 1536306 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644824142 |
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| Product | peptidase C14 caspase catalytic subunit p20 |
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| Protein accession | YP_002975384 |
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| Protein GI | 241204288 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4249] Uncharacterized protein containing caspase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.388564 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.00312965 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATCGGA AAATGGCAGC GCTGGTGATT GGGGTGGCAG ACTACTCCGA GGGAAACAAG
CTCGCCAATC CCGTTCACGA TGCTGTTGAC CTAGGCGACA AATTGAGGGG TTACGGGTTC
GAGGTCATCG TCGTAACTGA CTGCACGAAA AGGGATATGG ACAAGCAGTT AAAGGAGTTC
CGTACGCTGC TAGAAACCCA CGACGTGGGG CTGTTCTTCT TTGCGGGCCA TGGAATGCAA
ATCGATGGGA CCAACTTCCT TCTTGCCACC GATACCGAAA TGGACACGGA GTTGGACGCA
AAGCACACGT CCCTTTCGCT CGACAGAGTG GTGGACGTCA TGGCGAAGTC GGCAGCGTCC
ACTAAGATCA TCGTACTCGA TGCATGTCGG AATAACCCCT GGGAGCGCGC TTGGCATCGT
GGCCCAGCAC TTAGGGGGCT TGCTTCGGTT TACGCGCCGA AGGGAACTAT AATTGGCTTT
GCGACATCTC CCGGAGAGGT TGCGTTGGAT GGCGCGGGCC GCAACGGGAC ATACACCGAA
GCATTACTCG AGCATATCGA CACTCCTGAT AGCTCCATCG AGACCATGTT CAAGCGCGTA
CGCAATACAG TTGCGGCATC GAGTGGAGGT CGGCAGACCA CGTGGGAACA CACCTCGCTA
TCCGGAGAGT TCTATTTTAA CCTGAGTTTG GGTAACTTGG TTGATGAATA CGATGGCACC
GCGCTTGCGG ACAGCCTCTT CGTCCTCGAT CCTGGCCGGA AATCGCACAA CATCATTGCC
GGACTGAAGA CATATAACTG GTATAAACAG AACCCAGCAC TAGATCGGCT CGACGCCGCC
TCTGCAAACA AAATGTCGAA AGACAACTTG TTCGTCCTCG GGCGGAATAT CTACCAGGCG
GCCTGCGGAT CAGCGGGCTC CGCAATCACG TTCATCGACA ATTTCATGGA TAAGACACGC
GGATTCAATC GGGAAGCAAG GAAGTCACTT CTGGACGGCA TCTTGTTCGA AGTCTTCTTC
GACTCCCAAG CGCATATGCG GGACAAAATG AAAAGACGGT ATTTTAACGA GGTTTTCGAG
TTGCAGCGCT TCGCCGACCT GAAGCAAAGT TTCGATTTCA TTGCAGAAGT GCTGACCACG
GCCGCTGGCA AGTTCTATGC CTTGCCTGGC AAGGGACACG ATCTGGCTGT AAGCGTTTCC
ACGAAGAGCG AGGATGGCAT GATCATCGTG GACGCAGTGT ATGTCGGAGG TGTGGACGTG
CTTCGGCGAG AAGACGATAA TGATGCCGAT GAACACGACC CACCTCGTTA TTGGAGGCTG
AGCCCACAGG AAATAAAGGA GAGACTTAGC GAAGAGCTTG TCGTACCTAC ACGCTTGTTG
AAGTTGACTT TCACTCCTGG TGCCGCTGTA AAGGAAGAGG AATTGGGGTT CCCAATGGGT
TGGACTGTCA GGCAAACATG A
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| Protein sequence | MNRKMAALVI GVADYSEGNK LANPVHDAVD LGDKLRGYGF EVIVVTDCTK RDMDKQLKEF
RTLLETHDVG LFFFAGHGMQ IDGTNFLLAT DTEMDTELDA KHTSLSLDRV VDVMAKSAAS
TKIIVLDACR NNPWERAWHR GPALRGLASV YAPKGTIIGF ATSPGEVALD GAGRNGTYTE
ALLEHIDTPD SSIETMFKRV RNTVAASSGG RQTTWEHTSL SGEFYFNLSL GNLVDEYDGT
ALADSLFVLD PGRKSHNIIA GLKTYNWYKQ NPALDRLDAA SANKMSKDNL FVLGRNIYQA
ACGSAGSAIT FIDNFMDKTR GFNREARKSL LDGILFEVFF DSQAHMRDKM KRRYFNEVFE
LQRFADLKQS FDFIAEVLTT AAGKFYALPG KGHDLAVSVS TKSEDGMIIV DAVYVGGVDV
LRREDDNDAD EHDPPRYWRL SPQEIKERLS EELVVPTRLL KLTFTPGAAV KEEELGFPMG
WTVRQT
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