| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_1544 |
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| Symbol | |
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| ID | 8012625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | + |
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| Start bp | 1523511 |
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| End bp | 1525850 |
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| Gene Length | 2340 bp |
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| Protein Length | 779 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644824130 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_002975372 |
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| Protein GI | 241204276 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0480666 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.142992 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACG TCTCGCATGC GGAAACTCTG GGAACGTCGC ACATCGAGGG TGCCGAAAAG
TACGATATGG AGCAGTTCCT GTTATCGGCG TTGCACGCGG CTCGAGCGGT CAGGGCGTTC
ATCGTGACGT CCGGCGACGA TGGCCTTGTC GTCGCCGCCA ATGCCGGCGC CGAAGATGTC
TCATCTGTGG CTCTTCACGA ACGGGATCAG ATCATAGTTC GCGCAGTGAT CGCCTCTGGG
AAAGGAAGGG CGGTTCCCGG TGCGCCCCGA TCAATCGTGT GCGTTCCAAT CAGTTTTCCC
GACCGTGCCA CGGCAGCGGT CTATCTGGAG ATAGACGGAG AGTACGTGTC CGACTGGCGG
TTGGAAAATC TCGAGTGGAT GGCGTCGACT TTCGCCGCCT CGCTCGCGAA GAGAACGGCC
GACGAGGAGT TGCGCTCTTT CAAGGAGGAA GCAGCCAGCG TGATGCGGGA GCTACGGCTC
AACCTCGACA TGATCCCCGC CCTTACATGG ATCGGTGGCC CCGGCGGCGA GCTCGAAGAT
GCAAGCAGGC AATGGCACGA ATACACGGGC ATAAAGCGGG AAGACGCCCT CGGAATGGGG
TTCCTAGCGT CGTTTCATCC CGACGATGTT CAGAAACTCA TCGCCGCGTG GACCGAACTT
CTTGTCGCAG GCAAGCCCGG CGGCGTCGAA GCGCGCATCC TGCGGCACGA CGGGGAAGCG
AGGTACTTCA TGCTCCGGGC CGTGCCGCTC ATCGGAGACG ATGGCAAGGT GCGGAAGTGG
TACGGCATCA ATACGGACAT CGACGACCTG AAACGTGCAG AATTCGAACT TGCTAAAAGC
CAGGCCGTAA TGGCCGAGGC GCAGCGGATC ATCGAGACCG GCAGTTGGTC GTGGGACATG
ATATCGGACG TCTTCACCTG TTCGGCCGAG TGCATGAAGA TCGTCGGCCT TCCGAGCACC
GAGATCACCT TCGAAACCCT GATGGAAAGG GTGCATCCAG AAGATCGGGA ACTGGTCGCG
GAGGCCCACG GCCGCGCACT TCAAGGTGAC GAACTGAACG TCGAGCACCG CTTCGTTTTG
CCGGATGGCA CCGTCAAGTT CATTCGGGCC CGCGGCCGCC TGATCTATGA AAGGAGTCAT
CCGCGCGCCT ACATCGGCAC GATCGTCGAC GTCACCGAGG CGAGGCTTTC CGAAGAGCGG
ATACAAAGCT CGCTTGCCGA GGCGCAGCGG GCGCAGGCCT CGCTTGCCGA AGCACAGAAA
CTCACTCACG TAGGCAGTTT CCAGATCAGA CCCTCTACCG GCGAGATTAT CTGGTCGGCG
GAGACCTACA ACATATATGG TCTCGACCCG GCGGAGCCAC TGACGGGCGA GGCGATCATG
GCGCGCATCC ACCCCGACGA TCGCGAGAGG ATCAACGAGA TCCATGCGAC GGGGATCCGT
GACCGAAAGC CCTGGGAGGC GGAGCACCGG CTTCTCATGC CGGACGGGAC GATCAGACAT
GTACATTGCG TAACACGCGT CGAGTCGGAT CCTGACGAAG AGCCGGAGGT GTTCGGGGCG
ATCATCGATC TGACGGATCG CATCAACGGC GAGGAGGCGC TCAGGAAAGC TCAGGCAGAC
GTCGTCAGAA TGAACCGCCT GACGGCGATG GGCGCGGTCA CCGTCTCTAT CGCTCACGAA
ATGAACCAGC CGCTCATGGC CATCGTGACG AATGCGGCCA CGTGTCTAAG CTGGCTCGAT
CGCCCGGAAC CGGTTCTGGA TGAAGCGAAG GTAGCAGCGG AACGGATCGT CAAGGATGGG
AAACGGGCAG GCGACGTCCT GCTGAATGTC AGAAACATGG CGCGCAATTC GCGTCCATCC
ATCGCGATAG TGGATATCAA CGAAGTCGTC GCAGACGTGC TGACGATGAT GCGAAGCGAA
CTTCGCAGCC GGCAGATTAA CGCATCCGTT TCGTTGTCGT CGGCCGTGAG GTCAATCCGG
GGCGACAAGG TTCAGCTTCA ACAGGTCCTC CTGAACCTCA TGCTCAATGC GGCCGAAGCG
ATGACGGGCA AGGAGCATGG CCGGACCATG AGCGTGGTCA GTGAGGATCG GGGGGCGCAC
TCGGTGGTCG TCCGAGTCGA GGACAATGGC CATGGTCTCG ACCCCATTGC ATCCGGACGT
ATTTTCGAAG CATTCTTCTC CACCAAGCCG GAGGGTACCG GCATGGGTCT GGCGATTTGC
AAGTCTATCA TTGAGGCGCA TAACGGGACG TTGTCCGCGC GACCTCGGAC GCCGGGAGGA
TCGGTGTTCG AGTTCGCGAT ACCATATGCA AGGGGGACAG ATGAACCAGA AGCAGCGTGA
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| Protein sequence | MNDVSHAETL GTSHIEGAEK YDMEQFLLSA LHAARAVRAF IVTSGDDGLV VAANAGAEDV
SSVALHERDQ IIVRAVIASG KGRAVPGAPR SIVCVPISFP DRATAAVYLE IDGEYVSDWR
LENLEWMAST FAASLAKRTA DEELRSFKEE AASVMRELRL NLDMIPALTW IGGPGGELED
ASRQWHEYTG IKREDALGMG FLASFHPDDV QKLIAAWTEL LVAGKPGGVE ARILRHDGEA
RYFMLRAVPL IGDDGKVRKW YGINTDIDDL KRAEFELAKS QAVMAEAQRI IETGSWSWDM
ISDVFTCSAE CMKIVGLPST EITFETLMER VHPEDRELVA EAHGRALQGD ELNVEHRFVL
PDGTVKFIRA RGRLIYERSH PRAYIGTIVD VTEARLSEER IQSSLAEAQR AQASLAEAQK
LTHVGSFQIR PSTGEIIWSA ETYNIYGLDP AEPLTGEAIM ARIHPDDRER INEIHATGIR
DRKPWEAEHR LLMPDGTIRH VHCVTRVESD PDEEPEVFGA IIDLTDRING EEALRKAQAD
VVRMNRLTAM GAVTVSIAHE MNQPLMAIVT NAATCLSWLD RPEPVLDEAK VAAERIVKDG
KRAGDVLLNV RNMARNSRPS IAIVDINEVV ADVLTMMRSE LRSRQINASV SLSSAVRSIR
GDKVQLQQVL LNLMLNAAEA MTGKEHGRTM SVVSEDRGAH SVVVRVEDNG HGLDPIASGR
IFEAFFSTKP EGTGMGLAIC KSIIEAHNGT LSARPRTPGG SVFEFAIPYA RGTDEPEAA
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