Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_1268 |
Symbol | |
ID | 8012371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 1247848 |
End bp | 1249164 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644823849 |
Product | riboflavin biosynthesis protein RibD |
Protein accession | YP_002975099 |
Protein GI | 241204003 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0117] Pyrimidine deaminase |
TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain [TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0129609 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.16912 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGATCA CGCCGCATGA CGAACGTTTC ATGGCGGCGG CGATCCGCCT GTCGCGCTGG CACCTCGGCC GCACCGCCAC CAACCCCTCC GTCGGCTGCC TGATCGTCAG GGGCGGCGTC ATCGTCGGCC GTGCCGTGAC CGCCCTTGGC GGCCGCCCGC ATGCCGAGAC GCAAGCGCTC GCTGAGGCCG GCGCGCTCGC CCGCGGCGCC ACCGCTTATG TGACGCTCGA ACCCTGCTCG CATCACGGCA AGACGCCGCC CTGTTCCCAG GCGCTGATCG CTTATGGCGT TGCCCGCGTC GTCATCAGCG TCACCGATCC CGATCCGCGG GTTTCCGGCC GCGGCATCGC CATGCTGCGC GAAGCCGGCA TAGAGGTGGA TACCGGCGTG CTGGAGGCGG AAGGCAGGCA CTCGCTTGCC GCCTATCTCA CCCGCCAGAC GAAGAACCGG CCCTATGTGA CTCTCAAGCT TGCCGTTTCC GCCGATGGCA TGATCGGCCG CGAGGGGGCA GGGCAGGTGG CAATAACAGG CCCGGAGGCC CGCGCCCAGG TGCAGGCGCT GCGCGCCGAA ACCGATGCGA TCCTCGTCGG CATCGGTACC GCGATTGCGG ATGATCCGCT GCTGACGGTG CGTTCGCCAG GTCTTGAATC GCAATCGCCG ATCCGCATCG TCCTCGATCC TTCCCTGGCA TTGCCGCTGA CCAGCAAGCT CGTCGAGACT GCGCGGGAAG TGCCGGTCAT CGTGGTGGCG AGTGAGGAAG TGTGGCCGTT GTCGGCGGAT GCCGAGGGGT TACCCCCCTC TGCCCTGCCG GGCATTTCCC CCACAAGGGG GGAGATCGGC AAGGAGCCTG CTCCGCGTTC TCCAGCTTCC GATGATGATG GTTTCGCCTC CAGGCAAGAT GTGGGGCAAG AGGCTAGCCC CCAGCCAATC TCCCCACCTG TGGGGGAGAT GCCCGGCAGG GCAGAGGGGG GCATCCCACC CACAGATCCC ACAGACATGG AATCCCGCCG CGCAGCCCTC GAAGCCGCCG GCGTCGAGGT CGTCCATTGC AATCCCTATC ATCCGGAAGT CCTGTTGCCG GCACTCGCGA CGCGCGGTAT TTCCTCGCTT CTGGTCGAGG GCGGTGCAAA GACGGCGCGG CTTTTCCTCG AGGCTGGCCT TGTGGACCGC ATCCAGCTTT ATCAGGCGCC TGTTGTGATC GGCGAGGGCG GTATTGAATC TCCGCTTGAT GCAACCGACA TACCATCGGG TTTTGCCCAT ACGGGCACGC TGATGTTCGG CGGCGATCGC CTGGACGAAT ACGAAAGAGG GCTTTGA
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Protein sequence | MRITPHDERF MAAAIRLSRW HLGRTATNPS VGCLIVRGGV IVGRAVTALG GRPHAETQAL AEAGALARGA TAYVTLEPCS HHGKTPPCSQ ALIAYGVARV VISVTDPDPR VSGRGIAMLR EAGIEVDTGV LEAEGRHSLA AYLTRQTKNR PYVTLKLAVS ADGMIGREGA GQVAITGPEA RAQVQALRAE TDAILVGIGT AIADDPLLTV RSPGLESQSP IRIVLDPSLA LPLTSKLVET AREVPVIVVA SEEVWPLSAD AEGLPPSALP GISPTRGEIG KEPAPRSPAS DDDGFASRQD VGQEASPQPI SPPVGEMPGR AEGGIPPTDP TDMESRRAAL EAAGVEVVHC NPYHPEVLLP ALATRGISSL LVEGGAKTAR LFLEAGLVDR IQLYQAPVVI GEGGIESPLD ATDIPSGFAH TGTLMFGGDR LDEYERGL
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