Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_1251 |
Symbol | aspS |
ID | 8012354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 1230498 |
End bp | 1232288 |
Gene Length | 1791 bp |
Protein Length | 596 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644823832 |
Product | aspartyl-tRNA synthetase |
Protein accession | YP_002975082 |
Protein GI | 241203986 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0173] Aspartyl-tRNA synthetase |
TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0677524 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCATCGCT ATCGCAGCCA CACATGTGCC GCCCTCCGCA AGTCGGATGT CGGCTCGACC GTCCGTATTT CCGGCTGGGT TCACCGCGTT CGCGACCATG GCGGCGTTCT CTTCATCGAC CTTCGCGACC ATTACGGCAT CACCCAGGTG GTCGCCGATC CTGATAGCCC GGCCTTCAAG ATGGCGGAAA CCGTGCGCGG CGAATGGGTC ATCCGCATCG ATGGCCTCGT CAAGGCGCGC ACCGAAGACA CCGTCAACAA GACCATGGCG ACTGGCGAGA TCGAGCTCTA CGCGCAGGAG ATCGAAGTCC TCTCCGCCGC CAAGGAATTG CCGCTGCCGA TCTTCGGCGA GCCGGATTAT CCCGAAGACG TCCGCCTGAA GTATCGCTTC CTCGATCTTC GCCGCGAAAC GCTGCACAAG AACATCGTCA AGCGCACCCA GGTGATCTCC GCCATGCGCC GCGAAATGGG CAATGTCGGC TTTACCGAAT ATACGACGCC GATCCTGACG GCCTCCTCGC CGGAAGGCGC GCGCGACTTC CTCGTGCCGT CCCGCATCCA TCCCGGCACC TTCTACGCGC TGCCGCAGGC GCCGCAGCAG TACAAGCAAC TGCTGATGGT GGCGGGCTTC GACCGTTATT TCCAGATCGC GCCCTGCTTC CGCGACGAAG ACCCGCGCGC CGACCGCCTA CCGGGTGAAT TCTACCAGCT CGACCTCGAA ATGAGCTTCG TCACCCAGGA AGACGTCTGG GACACGATGG GTCCGCTGAT GACAGGCATT TTCGAAGAGT TCGCCGAAGG CAAGCCGGTC ACCAAGGAAT GGCCGCGCAT CCCCTATGAC GTGGCGATCC GTAAATATGG TTCGGACAAG CCGGACCTGC GCAACCCCAT CGTCATGGAA GCGGTCACCG AACATTTCGC CGGCTCCGGC TTCAAGGTCT TCGCCGGCAT GATCGCCTCT AACCCGAAGG TCGAGATCTG GGCGATCCCG GCAAAGACCG GCGGTTCCAG AGCGTTCTGC GATCGCATGA ATGCCTGGGC GCAGTCGACC GGTCAGCCTG GCCTCGGCTA CATCTTCTGG CGCAAGGAAG GTGACAAGCT CGAGGGCGCC GGCCCGCTTG CAAAGAACAT CGGCGAGGAG CGCACCGACG CGATCCGTAC CCAGCTCGGT CTCGATGACG GGGACGCCTG CTTCTTCGTT GCCGGCGATC CGGCGAAGTT CTACAAGTTT GCCGGTGAAG CCCGCACCAA GGCCGGCGAA GAGCTGAACC TTGTCGATCG CGACCGTTTC GAACTCTGCT GGATCGTCGA CTTCCCGTTC TTCGAATGGA GCGAGGAAGA AAAGAAAGTC GATTTCGCGC ACAACCCGTT CTCGATGCCG CAGGGCGGCC TCGAAGCGCT GCAGAGCCAG GATCCGTTGA CCATCAAGGC GTTCCAGTAT GATGCCGTCT GCAACGGCTT CGAAATCGCC TCAGGCTCGA TCCGTAACCA GTCGCCGGAA ACCATGGTGG CCGCCTTCGA GAAGGTCGGC CTCAGCCAGC AGGATGTCGA GGATCGTTTC GGCGGCCTCT ATCGCGCCTT CCAGTACGGC GCGCCCCCGC ATGGCGGTGC TGCCTTCGGT ATCGACCGTA TCATCATGCT GCTCGTCGGC GCGAAGAACC TGCGCGAAAT CTCGCTGTTC CCGATGAACC AGCAGGCCCA GGACCTGCTG ATGGGCGCGC CGAGCCCGGC AACCCCGACA CAGCTGCGCG AGCTCTCGAT CCGGCCGATC CCGCCGGTCA AGAAAGACTG A
|
Protein sequence | MHRYRSHTCA ALRKSDVGST VRISGWVHRV RDHGGVLFID LRDHYGITQV VADPDSPAFK MAETVRGEWV IRIDGLVKAR TEDTVNKTMA TGEIELYAQE IEVLSAAKEL PLPIFGEPDY PEDVRLKYRF LDLRRETLHK NIVKRTQVIS AMRREMGNVG FTEYTTPILT ASSPEGARDF LVPSRIHPGT FYALPQAPQQ YKQLLMVAGF DRYFQIAPCF RDEDPRADRL PGEFYQLDLE MSFVTQEDVW DTMGPLMTGI FEEFAEGKPV TKEWPRIPYD VAIRKYGSDK PDLRNPIVME AVTEHFAGSG FKVFAGMIAS NPKVEIWAIP AKTGGSRAFC DRMNAWAQST GQPGLGYIFW RKEGDKLEGA GPLAKNIGEE RTDAIRTQLG LDDGDACFFV AGDPAKFYKF AGEARTKAGE ELNLVDRDRF ELCWIVDFPF FEWSEEEKKV DFAHNPFSMP QGGLEALQSQ DPLTIKAFQY DAVCNGFEIA SGSIRNQSPE TMVAAFEKVG LSQQDVEDRF GGLYRAFQYG APPHGGAAFG IDRIIMLLVG AKNLREISLF PMNQQAQDLL MGAPSPATPT QLRELSIRPI PPVKKD
|
| |