Gene Rleg_1142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_1142 
Symbol 
ID8012261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp1122794 
End bp1123678 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content62% 
IMG OID644823726 
Productdihydrodipicolinate synthase 
Protein accessionYP_002974976 
Protein GI241203880 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID[TIGR00674] dihydrodipicolinate synthase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.530915 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAATG GGTCCATTCC CGCCCTCGTC ACCCCCTTCA CGGATGCCGG ACTGATCGAC 
GAAGACAGCT TCGCCGCTCA TGTCGACTGG CAGATCAAGG AAGGCAGCGG TGGTCTCGTT
CCGGTCGGCA CGACAGGCGA ATCCCCGACG CTGTCGCATG CCGAGCACAA ACGGGTGGTC
GAACTGTGCA TCGAAGTTGC CGCAAAACGC GTTCCCGTCA TGGCCGGCGC CGGCTCGAAC
AATACACGTG AGGCGATCGA GCTTGCCCAG CATGCCGAAA AGGTCGGTGC GAACGCCGTT
CTGGTCGTCA CGCCCTATTA CAACAAGCCG ACGCAGAAGG GTTTGATCGC CCATTTTTCG
GCGATCGCCG AGGCCGTCGA TCTGCCGATC TATATCTACA ATATCCCCGG CCGCTCGGTG
GTCGACATGA CGCCGGAAAC GATGGGTGCG CTCGCCAAGG CGCACAAAAA TATCGTCGGC
GTCAAGGATG CGACGGGCAA GATCGAGCGC GTCTCCGAGC AGCGCATCAC CTGCGGCGCG
GATTTCAGAC AATTATCCGG CGAGGATGCG ACGGCGCTCG GCTTCAACGC CCATGGCGGT
GTCGGCTGTA TTTCGGTAAC GGCCAATGTC GCCCCGCGCC TTTGCGCCGA CTTCCAGGCG
GCAACGCTGG CAGGCGACTA TGCCCGCGCC CTGGAATATC AGGATCGGCT GATGCCGCTC
CACAAGGCGA TCTTCCTTGA GCCGGGTCTT TGCGGCGCCA AATACGGGCT CTCCAAACTT
GGCCGGATGA GCCGCAACGT TCGTTCGCCC CTGCTTTCGA CGCTGGAGCC GGCAACGGAA
TCGGCGATTG ACGCCGCGAT GCGCCATGCA GGCCTGTTGA ACTGA
 
Protein sequence
MFNGSIPALV TPFTDAGLID EDSFAAHVDW QIKEGSGGLV PVGTTGESPT LSHAEHKRVV 
ELCIEVAAKR VPVMAGAGSN NTREAIELAQ HAEKVGANAV LVVTPYYNKP TQKGLIAHFS
AIAEAVDLPI YIYNIPGRSV VDMTPETMGA LAKAHKNIVG VKDATGKIER VSEQRITCGA
DFRQLSGEDA TALGFNAHGG VGCISVTANV APRLCADFQA ATLAGDYARA LEYQDRLMPL
HKAIFLEPGL CGAKYGLSKL GRMSRNVRSP LLSTLEPATE SAIDAAMRHA GLLN