Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_0955 |
Symbol | |
ID | 8012099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 941748 |
End bp | 943367 |
Gene Length | 1620 bp |
Protein Length | 539 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644823539 |
Product | drug resistance transporter, EmrB/QacA subfamily |
Protein accession | YP_002974790 |
Protein GI | 241203694 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCACTC TTCAGATCGC AGCCAACAGC AATGCGCTGG CGCGCCCCGC CGCCGCAGCG CCCGCGGCAC CTGCCGTCAT GAGCCCTCTG CGCATGTGGG CAGCCGTTGT CGGCTCGACG CTCGGCGCCT TCATGGCCGT CCTCAACATC CAGATCGTCA ACGCCTCGCT TGCCGATATC CAGGGCGCAA TCGGCGCCGG CACGGATGAC GGCGGCTGGA TTTCGACCTC CTATCTGATC GCCGAGATCG TCGTCATTCC GCTCAGTGCC TGGTTGGCGC GTGTCTTCTC GCTCCGCAAT TACCTGCTCA CCAACGCCAT CCTTTTCCTC ATCTTCTCCG TCGCTTGCGC CTTCGCGGCC AATCTGCAGC AGATGATCAT CCTCCGCGCC ATTCAGGGCT TTTCCGGCGG CGTGCTGATC CCGATGGCCT TCACCATCAT CATCACGCTG CTGCCCAAGG CCAAGCAGCC GATCGGCCTT GCCCTCTTTG CCCTGTCTGC CACCTTCGCG CCGGCGATCG GCCCGACGAT CGGCGGTTAT CTCACCGAGA ACTGGGGCTG GGAACATATC TTCTATGTCA ACCTGGTGCC CGGCGCGCTG ATGGTCGGCC TGCTCTGGGC CTCGCTCGAC CGGGCGCCGA TGAACCTGAA GCTGCTCGCC AAGGGCGACT GGCCTGGTAT CGTCACCATG GCGATCGGCC TGGCAGCCCT GCAGACCGTG CTGGAAGAGG GCAACAAGGA AGACTGGTTC GGCTCCGATT TCATTGTTCG CCTGTCTGTT ATCGCCGCCG TCTCGCTGAC GCTGTTCCTG ATCATCGAGC TGAAGACCGC CAATCCGCTG CTGAGCCTTC GCCTGCTGCT GCGCCGCAAC TTCGGCTTCG GCATCGTCGC CAATTTCCTG CTCGGTATCG CGCTTTACGG CTCGGTCTTC GTGCTGCCGA TCTATCTGAC CCGCATCCAG GGCTATAATT CCGAGCAGAT CGGCATGGTT CTCGCCTGGA CCGGCATCCC GCAGTTGCTG CTGATCCCGC TGGTGCCGCA GCTGATGAAG CGTTTCGACG TGCGCCTGCT GATCGTCGTC GGCTTTGCCC TCTTTGCCGC CTCGAACTTC ATGAACGTCC ACATGACCGG CGATTATGCC AGCGACCAGC TGTTCTGGCC GAACATCGTC CGTGCCATCG GCCAAGCGCT CGTCTTCACG CCGCTTTCGG CAATCGCCAC CGCCGGCATC GAGCAAGAAA ATGCCGGCTC GGCGTCCGCG CTCTTCAACA TGATGCGCAA TCTCGGCGGT GCCGTCGGCA TCGCTTCGCT GCAAACCTTC CTGTCGAAAC GCGAGCAGTT CCACTCGAAT ATCCTGACCC ACTCGGTCTC GATCTTCGAG GAAGCCACCC GCGATCGCAT CGCCAGGCTC ACCGGCTATT TCATGAGCCA CGGTGTCAGC GATCAGGCGC TTGCCGGCCA TAAGGCCGTC GTCGCCATCG CGCTCAAAAT ACGCAAACAG GCCAATATCA TGGCCTTCAG CGACACCTTC TTCCTGCTCG GCGTCGCCCT CGTCGTCGCC CTGCTTGCAA CCCTGCTTCT GAAAAAACCC GGTCAACTCT CCGGCGGCGG CGCCCACTAG
|
Protein sequence | MATLQIAANS NALARPAAAA PAAPAVMSPL RMWAAVVGST LGAFMAVLNI QIVNASLADI QGAIGAGTDD GGWISTSYLI AEIVVIPLSA WLARVFSLRN YLLTNAILFL IFSVACAFAA NLQQMIILRA IQGFSGGVLI PMAFTIIITL LPKAKQPIGL ALFALSATFA PAIGPTIGGY LTENWGWEHI FYVNLVPGAL MVGLLWASLD RAPMNLKLLA KGDWPGIVTM AIGLAALQTV LEEGNKEDWF GSDFIVRLSV IAAVSLTLFL IIELKTANPL LSLRLLLRRN FGFGIVANFL LGIALYGSVF VLPIYLTRIQ GYNSEQIGMV LAWTGIPQLL LIPLVPQLMK RFDVRLLIVV GFALFAASNF MNVHMTGDYA SDQLFWPNIV RAIGQALVFT PLSAIATAGI EQENAGSASA LFNMMRNLGG AVGIASLQTF LSKREQFHSN ILTHSVSIFE EATRDRIARL TGYFMSHGVS DQALAGHKAV VAIALKIRKQ ANIMAFSDTF FLLGVALVVA LLATLLLKKP GQLSGGGAH
|
| |