| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_0689 |
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| Symbol | |
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| ID | 8011862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | - |
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| Start bp | 716136 |
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| End bp | 719033 |
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| Gene Length | 2898 bp |
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| Protein Length | 965 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644823279 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and periplasmic/7TM domain sensor(s) |
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| Protein accession | YP_002974532 |
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| Protein GI | 241203436 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCCCA AGTCACCGTC CGGACGAGTG ATCGCGGTGA TCGCAGCCCT TTTCCTGGCG
GCCTTCGCCT TCGTGGCGGG TGTTGCCCAG GCGGCCGAAC CTGTAAAAAT TTCCCGTGAC
GATACCGCGC TCGACCTGAC GGCAACGACG GAGATCTACG CCAACCAGGG CGAAGCCTTC
CAGGTTTCGA CGGCGGCCGG CGCCGACGGC ATCCGCCGCC GCATCGAGGT CAGGGCAAGC
TCGGAGAACC ATCAGGGCGA CTGGGCGGTA TTTGCGCTTG CCAATGTCTC GGAAGAACAG
CTCGAGCGCG TCATCGTCGC GCCGCATTTC CGTCTGGTCA ATTCCAAGCT GTTCTGGCCG
GATCTCGGCT CGCAGCGCAT CAGCGCGATT ACGCCGAGCG AAGGCTTCGC GCTCGACCGG
CAGCCGAGCG ACGAGGCCGA CGTCTTCCGC ATCACGCTGA ACCCCGGCGC CGTCATCACC
TTCGTCGCCG AACTGTCGAC GCCGGAACTG CCGCAGATCT ATCTCTGGGA ACCGAACGCC
TACAAGGACA CGATCAACGC CTTCACGCTC TATCGCGGCA TCGTGCTCGG CATTGCCGGC
CTGCTTGCCG TGTTCCTGAC CATCCTCTTC GTCGTCAAGG GCACCTCGAT GCTGCCGGCG
ACGGCAGCAC TTGCCTGGGC GGTGCTCGGC TATATCTGCG TCGATTTCGG TTTTCTCGGC
AAGCTGATCA GCGTCGCCTC GGCCGACCAG CGAATATGGC GCGCCTGCGC CGAGGTGGCG
CTGGCGTCGA GTTTCGTCAT CTTCCTCTTC ACCTATCTCA ACCTCAACCG CTGGCATGCG
CATCTGGGTT ACGCCACGCT TGCCTGGGTG CTCGGCCTTG CCCTGCTCTT CGGCGTGGCG
ATCTACGATC CGTCGATTGC CGCCGGCATT GCCAGGCTTT CCTTCGCGCT GACGGCGACG
ATGGGGTTGC TGCTGATCAT CTATCTCGGC TTCAACCGCT ACGACCGCGC CATCCTTTTG
GTGCCGGCCT GGGCGCTGAT CCTCGTCTGG CTGTTCGGGG CGTGGCTGAC GGTCACCGGA
CGGCTCGACA ACGACATCAT CCAGCCAGCA CTCGGCGGCG GCCTGGTGCT GATCGTGCTG
TTGATCGGCT TCACTGTCAT GCAGCATGCT TTTGCCGGCG GCGCCTTCCA GCAGGGGCTG
TTTTCCGATC TCGAGCGGCA ATCGCTGGCG CTGACCGGCT CCGGCGACAT GGTCTGGGAT
TGGGACGTGG CGCGCGACCG CGTCGTCACC ATTCCCGACG TCTCGATCAA GCTCGGCCTG
TCGCCCGGCG CCATGCATGG CGCGGCGCGC AACTGGCTGC CGCGGCTGCA CCCCGACGAC
CGCGACCGCT TCCGCGCTAC GCTCGACGTG CTGCTCGAAC ACCGCCGCGG GCGGCTGAAC
CACGAATTCC GCATTCGCGC CGAGGACGGG CATTTCCACT GGCTGCTGAT CCGCGCCCGG
CCGGTGCTCG GCTCGAACGG CGAAATCATC CGCTGCGTCG GCACGATCGT CGACGTGACC
GAACAGAAGA ATTCCGTCGA GCGGCTGCTG CACGATGCGC TGCACGACAA TCTGACCGGC
CTGCCGAACC GGCAGGTCTT CCTCGACCGG TTGCAGTCGG TGTTGGCACT GGCGCCGGGC
GGCGACACGC TGCGGCCGAC GGTGATGGTG ATCGATATCG ACCGCTACAA GCTGGTCAAT
GATTCGCTCG GCGTTGCCGC CGGCGACAAT ATCCTCATCG CGCTGACGCG GCGGCTACGC
CGCCTCTTGA AACCGCAGGA CACGCTGGCG CGGCTTGCCG GCGACCAGTT CGGCCTGATC
CTGGTTTCCG AGCACAATCC GGCCAAGGTC GCCGATTTTG CCGATGCGAT CAGCAAGGCG
ATCATGGTAC CGATCAACTT CGCCAATCGC GAGATCATCC TGACCGCCTC GGTCGGGCTT
GCCTCCTGGG TCGACCGGCA GGAGAGCGCC ACCGGCCTGC TCAGCGATGC CGAGCTTGCG
ATGTACCGGG CAAAACGAGC CGGCGGCAAC CGTGTCGAGC CGTTCCAGCC GGCCTTCCGC
GACTTCGGCA CCGACCGGCT GCAGCTCGAA ACGGATCTGC GCCGCGCCAT CGAGCGCAAA
GAATTGTCGA TGGTCTACCA GCCGATCGCA AGGCTGGAAG ATGTCGAGGT CGCCGGTTTC
GAGGCGCTGA TGCGCTGGGA ACATCCCAAA CGCGGCAATA TCCCGCCGTC CGAATTCATC
CCGATCGCCG AGGCCTCCGA TCTTATCGGC CCGCTCGGCA TGTTCGCACT GGAACAGGCG
ACCAACGATC TGATGAGCTG GCAGCACCAG ACCGGCGAAT TGCCGATCTT CGTCTCGATC
AATCTGTCGA GCGTGCAGTT GCTCAATAAC GAGCTCTATG ACGACGTGCG TTCGGTTCTC
GCCAAGACGC ATTGCCAGCC CTCGCGCCTC AAGCTCGAAC TGACGGAATC CATGGTGATG
GAAAATCCGG AACAGGCCCG GCTGGTGCTG CAGAAGCTGA AGGAAGCCGG CATCGGACTG
GCGCTCGACG ATTTCGGCAC TGGCTATTCG TCGCTCGCCT ATCTCACCCG CTTCCCCTTC
GACACGATCA AGCTCGACAA GACTTTGGTG CGCGACAGCA GCGACAAGAA GGCGATCGTG
CTCCGGTCGG TGATATCAAT GGCGCGCGAA CTCGACATGA AGGTGGTGGC GGAGGGGATC
GAATCCAACG AGGATGCGAT CGAGCTTGCC AAGATGGGCT GCAACTACGG CCAGAGCTAC
CTTTTCGGCC CGCCAATCCC TTCGGAATCG GTGCTGCGGC TGCTGCGCGA CCGCTTTCCG
CTGACGAAAC GGGCCTGA
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| Protein sequence | MLPKSPSGRV IAVIAALFLA AFAFVAGVAQ AAEPVKISRD DTALDLTATT EIYANQGEAF
QVSTAAGADG IRRRIEVRAS SENHQGDWAV FALANVSEEQ LERVIVAPHF RLVNSKLFWP
DLGSQRISAI TPSEGFALDR QPSDEADVFR ITLNPGAVIT FVAELSTPEL PQIYLWEPNA
YKDTINAFTL YRGIVLGIAG LLAVFLTILF VVKGTSMLPA TAALAWAVLG YICVDFGFLG
KLISVASADQ RIWRACAEVA LASSFVIFLF TYLNLNRWHA HLGYATLAWV LGLALLFGVA
IYDPSIAAGI ARLSFALTAT MGLLLIIYLG FNRYDRAILL VPAWALILVW LFGAWLTVTG
RLDNDIIQPA LGGGLVLIVL LIGFTVMQHA FAGGAFQQGL FSDLERQSLA LTGSGDMVWD
WDVARDRVVT IPDVSIKLGL SPGAMHGAAR NWLPRLHPDD RDRFRATLDV LLEHRRGRLN
HEFRIRAEDG HFHWLLIRAR PVLGSNGEII RCVGTIVDVT EQKNSVERLL HDALHDNLTG
LPNRQVFLDR LQSVLALAPG GDTLRPTVMV IDIDRYKLVN DSLGVAAGDN ILIALTRRLR
RLLKPQDTLA RLAGDQFGLI LVSEHNPAKV ADFADAISKA IMVPINFANR EIILTASVGL
ASWVDRQESA TGLLSDAELA MYRAKRAGGN RVEPFQPAFR DFGTDRLQLE TDLRRAIERK
ELSMVYQPIA RLEDVEVAGF EALMRWEHPK RGNIPPSEFI PIAEASDLIG PLGMFALEQA
TNDLMSWQHQ TGELPIFVSI NLSSVQLLNN ELYDDVRSVL AKTHCQPSRL KLELTESMVM
ENPEQARLVL QKLKEAGIGL ALDDFGTGYS SLAYLTRFPF DTIKLDKTLV RDSSDKKAIV
LRSVISMARE LDMKVVAEGI ESNEDAIELA KMGCNYGQSY LFGPPIPSES VLRLLRDRFP
LTKRA
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