Gene Rleg_0642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_0642 
Symbol 
ID8011821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp678395 
End bp679279 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content61% 
IMG OID644823232 
Productcytochrome c oxidase, subunit II 
Protein accessionYP_002974485 
Protein GI241203389 
COG category[C] Energy production and conversion 
COG ID[COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 
TIGRFAM ID[TIGR02866] cytochrome c oxidase, subunit II 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.439468 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGG CTTATGCAGC CCTGACCACG CTGGTCTGTC TGCTTTTTGC TTCCGGCACA 
TATGCCGACC AGCCCATGCC GTGGCAGGCG ACGCTGCAGC CGGCGGCAAC GCCGATCATG
CGGGAAATCC ACTGGTTCGA ACAATATACC CTGTGGTTTA TCGTTCCGAT CACGCTGTTC
GTTCTGGCCC TGCTCATCGT CGTCTGTTTC AAGTTCCGCG CCAGCGCGAA CCCGGTTCCC
TCGAAGACGA GCCACAACAC GCTGATCGAG ATTGCCTGGA CCGTGGGGCC GGTCCTGGTG
CTTCTTCTTC TCGCCATTCC TTCGTTCAAC CTGCTGACGG CGCAGCTGAC GCTGCCTGAA
AACCCTGACG TGACGATCAA GGCGACCGCC ACCCAGTGGC AGTGGAACTA CGAATATGAA
GGTTCGGGCG AAAACCCGCT GGCTTTCGAT TCCTACCTGC TGAAGGATCA GGACCGCGCC
GCCGCCGGCA AGGAAGACAA GTCGGTCTAT CCGCGTCTTC TCGCCGTCGA TAACGAACTG
GTCCTGCCGG TCAACAAGAC GGTCCGCGTT CTCGTGACTT CCGCGCCGAC CGACGTCATC
CATGCCTTCG CCATGCCTTC CTTCGGCGTC AAGATCGATG CCGTGCCGGG CCGCCTGAAC
GAGACCTGGT TCAGGGCCGA ACGCGAAGGC CTGTTCTACG GCCAGTGTTC CGAGCTCTGC
GGCAAGGACC ATGCGTTCAT GCCGATCGCC ATCCGCGTCG TCTCCGAGGA CAAGTACAAG
CAGTGGCTGA CCGCAGCCGC CAGCGACCTG CCCGGCGCCT ACAAGACACT CATGGCCGCA
ACCGATGGTC CCGCAAAGAC CGTCAACGTC GCCGAAGCAC AGTAA
 
Protein sequence
MKKAYAALTT LVCLLFASGT YADQPMPWQA TLQPAATPIM REIHWFEQYT LWFIVPITLF 
VLALLIVVCF KFRASANPVP SKTSHNTLIE IAWTVGPVLV LLLLAIPSFN LLTAQLTLPE
NPDVTIKATA TQWQWNYEYE GSGENPLAFD SYLLKDQDRA AAGKEDKSVY PRLLAVDNEL
VLPVNKTVRV LVTSAPTDVI HAFAMPSFGV KIDAVPGRLN ETWFRAEREG LFYGQCSELC
GKDHAFMPIA IRVVSEDKYK QWLTAAASDL PGAYKTLMAA TDGPAKTVNV AEAQ