| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_0337 |
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| Symbol | fliF |
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| ID | 8011548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | + |
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| Start bp | 346810 |
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| End bp | 348501 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644822932 |
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| Product | flagellar MS-ring protein |
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| Protein accession | YP_002974187 |
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| Protein GI | 241203091 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.548751 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.254086 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTGT TAAATCAATT AGTTCAGATC TTTAAGAACT TCGGTTCCCT TGGCCGAACA
CGCCTGATGA TTCTGGGAGG CGTCGGTGCC GTTTCCATTG CAATCGTCCT TGCGGCCGCT
CTTTTCGTCA ACAAGCCGGC ACAGGAAACA CTCTATGTCG GTCTGGATTC GCCCGATCTC
AACCAGATCA GCATGGCGCT TGCCGAAGCC AACATCAATT TCCAGGTCGG CACCGACGGC
ACCAGCATCA GCGTTCCCGC TGGGATGACG GGCAAGGCCC GCCTGATGCT TGCCGAGCGC
GGCCTGCCGA ACAGCGCCAA TGCCGGTTAC GAACTCTTTG ACAATGTCGG CTCCCTCGGC
CTGACCTCCT TCATGCAGGA GGTGACGCGG GTTCGAGCGC TGGAAGGCGA AATCGCCCGC
ACCATCCAGT CGATCTCGGG TATAACAGCC GCGCGCGTCC ATATCGTCAT GCCGGAGGTT
GGAAACTTCC GGAAGGCGGA GCAGAAACCG ACCGCATCCG TCATGATTCG CGCAAGCGCT
ACCACCGGGC GCAGCGCGGC GACCTCGATC CGCCACCTCG TCGCCTCGGC CGTGCCGGGG
CTTGACGTCG ATGACGTCAC CATCCTCGAT TCCGCCGGCC AGCTCCTCGC TTCCGGCGAC
GAGGCGAGCA ACAGCTCGCT GAACCGCTCG CTCAACATCG TCCAGAACGT TCAGCAGGAA
GTCGAATCCA ACATCGACAA GGCGCTGGCA CCCTTCCTCG GCATGGACAA CTTCCGTTCC
AGCGTCACCG CCGATCTCAA CACCGACGCC CAGCAGATCC AGGAAACGAC CTACGATCCC
GAATCCAAGG TCGAACGTTC GGTCCGCTCG ACCAAGGAAG CCCAGCAGTC GCAGCAGAAG
CAGTCCGATA GCGCGACGAC GGTCGAGCAG AACATTCCGC AGGCGGCTCC CGAGGCCGGC
GGCTCCGCCG GGCCCGAATC GCAAGACAAG TCCGACAAGC GCGAAGAGCA GACCAACTAC
GAAATCAACA GCAAGACGAC GGCGACGACC CGCAGCAGCT ATAAGGTCGA AAAGCTTTCG
ATCGCCGTGG TGGTCAACAA GGGCCGCATC GCCAAGATGG TCGGTGAGCC CGCCGACCAG
ACAAAGGTCG ACGCCTATCT CGCCGAAATG CAGAAGATCG TCGCCTCGGC GGCCGGCATC
GACGCCAAGC GCGGCGACGT CGTCACCGTC ACGGCGATGG ACTTCCTCGA AAATCAGCTG
CTCGAAGACG CCACCGGTGG TGTCCGCGTC ATGGATATGC TGAGCCGCAA TCTGGCCGGC
ATCATCAACT CGCTCGCCTT TGTCGCGGTC GCCTTCTTGG TGGTCTGGAT GGGCTTGCGG
CCACTGGTGC GCAGCGTCAG CGGCAACGGC AGCTCTGCGG CTTTCGGCGA CGCGACGCCG
GAAGCGGCCG GCCTCGAGCT TCCGGACTTC GCGCCTGCAT CGGGAGCACC CGGAGGCGCT
CTCATGGACG GCTTCGGGTC CGACTTCGGC TTCGACAGTA CCGAGGACCT GCTCAGCCTC
GGCGACGACG ATGGAAACTT CAATCGGCGC GTCAAGGAAG GCCCGGAACG CAAGCTTTCC
CGTATGGTCG AGATCAACGA GGAACGCGCC GCGAAAATCC TCAGGAAATG GGCGATCGAC
GAAGCAGCGT AA
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| Protein sequence | MNLLNQLVQI FKNFGSLGRT RLMILGGVGA VSIAIVLAAA LFVNKPAQET LYVGLDSPDL
NQISMALAEA NINFQVGTDG TSISVPAGMT GKARLMLAER GLPNSANAGY ELFDNVGSLG
LTSFMQEVTR VRALEGEIAR TIQSISGITA ARVHIVMPEV GNFRKAEQKP TASVMIRASA
TTGRSAATSI RHLVASAVPG LDVDDVTILD SAGQLLASGD EASNSSLNRS LNIVQNVQQE
VESNIDKALA PFLGMDNFRS SVTADLNTDA QQIQETTYDP ESKVERSVRS TKEAQQSQQK
QSDSATTVEQ NIPQAAPEAG GSAGPESQDK SDKREEQTNY EINSKTTATT RSSYKVEKLS
IAVVVNKGRI AKMVGEPADQ TKVDAYLAEM QKIVASAAGI DAKRGDVVTV TAMDFLENQL
LEDATGGVRV MDMLSRNLAG IINSLAFVAV AFLVVWMGLR PLVRSVSGNG SSAAFGDATP
EAAGLELPDF APASGAPGGA LMDGFGSDFG FDSTEDLLSL GDDDGNFNRR VKEGPERKLS
RMVEINEERA AKILRKWAID EAA
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