| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_0287 |
|---|
| Symbol | |
|---|
| ID | 8011504 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | - |
|---|
| Start bp | 295867 |
|---|
| End bp | 297300 |
|---|
| Gene Length | 1434 bp |
|---|
| Protein Length | 477 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644822882 |
|---|
| Product | extracellular solute-binding protein family 1 |
|---|
| Protein accession | YP_002974137 |
|---|
| Protein GI | 241203041 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.635572 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACTATG CTTTGAAGGC TAGCGCGCTT GCGCTGACGC TCAGCCTCGC CGCCACTGCT
TCGCCTGCCT GGGCTGATTT CTGGTCCGAC GCCGGCGCCA AATTCAAGGG CGTGACACTG
CACGGCGTCA CCGAAAGCAC CCCGCCATCG AACTACATCA GGAATGTGCT TGCTCCGGAA
TTCGAAAAGA AGACCGGCAT CAAGGTCGAC ATCGAGACGA CGTCCTGGGA TCAGATGTAC
GACAAGGCCA TCAAGGACAT GGAAGCCAAG ACTGGTATCT ATGACATGGT CTACATCGAG
CAGGACATCA TCTACTCCTA TCTCGCCAGG AATTTCCTCG TCGACATCAC CAAGACGCTT
AAAGACCAGC CGGATCTGAA GGCGCCGACC TACGACGATG CGAACTTCAC CAGCTTTGCC
GACTATTTCA AGGACGCGAG CGGCGATCTC TTCGGCGTTC CGATGGAAGC CTTCCTGAAG
GCGTATCTCT ATCGTAAGGA CCTGTTCGAA GATCCGAAGA TCAAGGAAGC TTTCAAGAAG
GAAACCGGCA AGGACCTGAA GCCGGCGACC ACACACGCGG AATACACCGA GATCGCCGAA
TTCTTCACGA AGTACGGCAA GGACAACGGT ATGGAGCTCT GGGGCACCAC CGCTCAGGCA
CATACCGGCC ATCCGGCGTC CTGGTATGAA TTCTTCGAGT CCATCGCGCC GACCTTCGGC
GTCTACAATT GGGGCATCGA CGCCAAGAAC AATTATGCGG CGACGGTCGA ACATGGCGGC
GCAATGAACG GCGACAAGGC CAAGGCCGCG TTGAAGTACT GGCTGCACCT GCGCGACATC
GCTCCTCCGG AATCGACGCA GTCAACCTGG ACGGAAACCG CAACGACCTT CGCCGCGGGC
CGCGTCGCCC AGGGCCTGAT CTACGGTGAG AACGCCGCGT GGATCGCAAG CGATCCGGCG
CAGTCGAAGG TGGTCGGCCA GGTCGGTTTC GCTCTGCCGC CGCTCGAGCC GGGCGTATTG
GACGACGCGA AAGCTGGAAA GGGCTATATC GGCTACTACG ATGGCGGCGC CTTCGGCGTT
CCGGTCACGT CCAAGAACAA GGAAGCATCA CTGCTGTTCC TCGAATTCAT CGGCCAGAAC
GAAGTGCAGC CCGATTGGGC GATCGCCGCA CCGCGCATCA CCAACAAGGC GACGTTCGAC
GATCCGAAGG TGAAGGAGAT GGACGTCAAG CTCGGCGGCT TCTACACGAT GCTGAAGGAC
GACGGCAAGC TCTTCGCCGG CGCTCCCCCC TACCCCTTCC ATGCGCAGGT GCGTGAAGCG
ACCGCTCCTA TCTTCTACGA CATCCTGACC GGCAAGATCG GGCCCGATGA AGGCCTCGAC
CAGATGGCGG CCAAGGCCGA AGAAGAGCTC ACCTCGCTCG GCTATCGCAA ATAA
|
|---|
| Protein sequence | MNYALKASAL ALTLSLAATA SPAWADFWSD AGAKFKGVTL HGVTESTPPS NYIRNVLAPE
FEKKTGIKVD IETTSWDQMY DKAIKDMEAK TGIYDMVYIE QDIIYSYLAR NFLVDITKTL
KDQPDLKAPT YDDANFTSFA DYFKDASGDL FGVPMEAFLK AYLYRKDLFE DPKIKEAFKK
ETGKDLKPAT THAEYTEIAE FFTKYGKDNG MELWGTTAQA HTGHPASWYE FFESIAPTFG
VYNWGIDAKN NYAATVEHGG AMNGDKAKAA LKYWLHLRDI APPESTQSTW TETATTFAAG
RVAQGLIYGE NAAWIASDPA QSKVVGQVGF ALPPLEPGVL DDAKAGKGYI GYYDGGAFGV
PVTSKNKEAS LLFLEFIGQN EVQPDWAIAA PRITNKATFD DPKVKEMDVK LGGFYTMLKD
DGKLFAGAPP YPFHAQVREA TAPIFYDILT GKIGPDEGLD QMAAKAEEEL TSLGYRK
|
|---|
| |