| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_0122 |
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| Symbol | |
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| ID | 8011360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | - |
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| Start bp | 115478 |
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| End bp | 117025 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644822713 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_002973972 |
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| Protein GI | 241202876 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.907666 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCGCA GCCAACCAAC CAGACCGCAG ATCGAGATCG TTGCCTGGCT CGCGATCTTC
CTGCTTCTCT TCTGCCTATC TTGGCTCTTC CAATGGCATG AAGGGCTGGA TGAGTTTATC
GAGAAGCATC ATGACTATCC GCTGGACCAC GCGCTCCTCG CCCTGAATAT CTCCGGGTTT
CTCGGGCTCA TCTATTCCGC GCTGAGGATC CGGGATCTTT CGAGGGAGGT TCATCGCAGG
CTGCAGGCCG AAAAGAACGT AGACTGGATT GCCTGTCACG ACACGCTGAC CGAACTGCCT
AACCGCAGAT TTCTGGATTC TATATGCGCG CAGGCGATGA GCGATCAGAG GGCACAAGAG
ACCTATGCCG TGTTCAGCAT CGATCTCGAC GGCTTCAAGA AGGTCAATGA TCTCCTGGGG
CATGATCACG GTGATGCGGT GCTGAAGACT GTTGCTCAGC GGCTCTCTTC CCTCTTTCCC
CGTGAGCGCG TTTTCCGCCT TGGGGGAGAC GAGTTCGTTG TTCTGGCGCG GCGCACTGGA
AATCCCGATC TTGTTGCGTT GGGGAACCGC ATCGTGACCG TGATCGGCAA GCCGTTCACA
TTCAATGGTG TCGCCGTCGA CCTCGGCGCC AGTGTCGGCT TCGCGCTTTT TCCGGAGAAC
GGCGATGACC TCGGTCAGGT CATTCGACAT TCCGACTGTG CGATGTATGT CGCCAAAAAG
CAGGGGCGCA ATCTGGTGAA GCCCTTCGTG CCTTCGATGC AGGACGAGTT GGCGAAGCGG
GTCCGGCTGG AAGCTGATCT GAGAGCAGCC ATCAAGAAGG CAGAGATCGT TCCCTACTAT
CAGCCGCTCG TGGACCTGAA AACGAATAGG ATTATCGGCT TCGAGGCCTT GGCACGCTGG
AAGACGGCCT CCGGCGAATT CATCCCACCG AACGAATTCA TTCCGGTGGC AGAGGAAGCC
GGTCTGATCG TCGAATTGAC AGACCAGCTG CTTCGCCACG CCTGCGCCGA TGCGCTTTCC
TGGCCAAATG AGCTCGTCCT GTCATTCAAC CTTTCTCCGA TCCAACTAAG CGACCGACTG
CTGGGGCTTA GAATTCTCAA GATATTGGGC GATGTCGGTC TGCCGGCGCA CAGGGTCGAG
CTTGAGGTGA CGGAGAGCGC CATCATCCAA GACGCCGTCA CTGCGCGAAT CGTCCTCGAC
GATCTGGTGA ACGCCGGCGT CAGGATTGCT CTCGACGACT TTGGAACAGG TTATTCCAGC
CTCTCACAAC TATCCAACTA CCGGTTCGAT AAGATCAAGA TCGACAGGAG TTTCGTCTCT
TCATTCGAAA CCAATGATAA GCAGGACAAG GTGATCAAGG CCATCATCGC TCTCGGTGCG
GGACTTGGCG TGACGATAAC CGCCGAGGGT ATCGAAGAAG AGAGCCAGCT TCAGCGGCTT
CAGGATCTGG GTTGCGACAT CGGCCAAGGA TATCTGCTTG GTAGGCCAGC CCCGGCCGCG
GAGCTTGCCA CAGATCACGT CAGCACTAGA ATTTTGCAAC GCGGTTGA
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| Protein sequence | MPRSQPTRPQ IEIVAWLAIF LLLFCLSWLF QWHEGLDEFI EKHHDYPLDH ALLALNISGF
LGLIYSALRI RDLSREVHRR LQAEKNVDWI ACHDTLTELP NRRFLDSICA QAMSDQRAQE
TYAVFSIDLD GFKKVNDLLG HDHGDAVLKT VAQRLSSLFP RERVFRLGGD EFVVLARRTG
NPDLVALGNR IVTVIGKPFT FNGVAVDLGA SVGFALFPEN GDDLGQVIRH SDCAMYVAKK
QGRNLVKPFV PSMQDELAKR VRLEADLRAA IKKAEIVPYY QPLVDLKTNR IIGFEALARW
KTASGEFIPP NEFIPVAEEA GLIVELTDQL LRHACADALS WPNELVLSFN LSPIQLSDRL
LGLRILKILG DVGLPAHRVE LEVTESAIIQ DAVTARIVLD DLVNAGVRIA LDDFGTGYSS
LSQLSNYRFD KIKIDRSFVS SFETNDKQDK VIKAIIALGA GLGVTITAEG IEEESQLQRL
QDLGCDIGQG YLLGRPAPAA ELATDHVSTR ILQRG
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