Gene Rleg_0024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_0024 
Symbol 
ID8011272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp22950 
End bp24371 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content57% 
IMG OID644822615 
Producttranscriptional regulator, GntR family with aminotransferase domain 
Protein accessionYP_002973875 
Protein GI241202779 
COG category[E] Amino acid transport and metabolism
[K] Transcription 
COG ID[COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0173306 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTCG CGAAGAGCAA CGACTTCCCG CCACTAGATC CGAACGCAGG CGTGCCTTTC 
TATCGGCAAA TCTACGATCG GTTCCGCGCC GCCATTGCCT CGGGCCTTTT GAAGCCCGGG
GACCGGATAC CCTCGGCGCG GGCGCTGACA AAAGAACTCG GTTTGGCAAG AGGTACGATC
GAATCGGCAT ATTCTTTGCT CGCAGCCGAG GGATACATCG AATCACACGG TCAAGCAGGT
ACCGTTGTAA CACCGGGCCT CAGTACGCTC ACGCCTGTGC CTGTCCCAGC CCTGCAGCAA
ATAAGCAATG CAGCGGAGGT TAGCTTTCGT CCGGATTCCA TTTTGCCGTT TCAGATGGGC
TTGCCAGCCC TCGATGCATT TCCTCGGAAG ATCTGGGCGC GGCTGGGCGC GGGATGCGTC
CGCGCTATGC AGCCGTCTGA TATGGTCCAT CCTCCAATAT ACGGCCTACC CGCACTGCGA
ACGGAGATCG CAACTTACCT GCAGGTTTCG CGAGGAATTG GCTGCTCACC TTCTCAGGTA
TTCATAACAT CAGGTTATCG CCACACCATA GAACTGATCG CCGACACTTT GTTGAAGGCA
GGAGACCACG TCTGGCTTGA GGATCCGGGG TATCCGCCAA CGCGAGAGAT ATTCAGACAC
ATGCAAATCA CGACCGTCCC AGTGCGAGTG GATCAAGACG GGATGGTGAT ATCCGATGGC
TTGAAGGCGG CCCATGGCGC TGTTGCAGCC GTTGTGACGC CCGCACACCA AAGTCCACTG
GGCATGTCTT TGATTTTGCC GCGGCGATTA GCGCTCCTGG ACTGGGCCGC GAAAAGTAAG
TCTTGGATTA TCGAGGACGA CTATGACGGC GAGTACCGCT ACGTTAGTCG TCCGCTGCCC
GCGCTAAAGA GCTTGGATCG CAATGGGCGT GTCCTCTATT CCGGCACCTT CAGCAAGGTT
CTCTTTCCGG GTCTTCGACT AGCTTATCTT GTCGTCCCGG AAGACCTGGT CGAGCGGTTT
GAGCATATCA GCCAAACTTT AGCGGGAGGG AGTCCTGAGC TTACACAAGC CATCGTCACC
GCGTTCATCA AAGAGGGGCA CTTCGCGCGT CATATCCAAC GGATGCGAAA ACTTTATGCT
CAGCGCAGGA AAGCAACGGC GATAGGCCTC GAGACGGTCC TTGGAAAGCA CATGAGCATT
GCCTCCCAAC CGGGTGGGAT GCACTTGATT CTCCAGCTGA AAAACCAGCA CTCAGACCGC
TTGCTTTCAG CGCGTATGCG GGAAAGCGGA CTTTACGCGG AGGCCTTGGC CGATTGGACG
ATGCTTTCGG AAGCGCCGGC GGCCCTGCTC GTCAACTTCA CGAACATTGG CAGCCAAAGC
GTGGCGGAGC ACCTCGCAAA GCGGATATTG CAACTCATGT GA
 
Protein sequence
MTVAKSNDFP PLDPNAGVPF YRQIYDRFRA AIASGLLKPG DRIPSARALT KELGLARGTI 
ESAYSLLAAE GYIESHGQAG TVVTPGLSTL TPVPVPALQQ ISNAAEVSFR PDSILPFQMG
LPALDAFPRK IWARLGAGCV RAMQPSDMVH PPIYGLPALR TEIATYLQVS RGIGCSPSQV
FITSGYRHTI ELIADTLLKA GDHVWLEDPG YPPTREIFRH MQITTVPVRV DQDGMVISDG
LKAAHGAVAA VVTPAHQSPL GMSLILPRRL ALLDWAAKSK SWIIEDDYDG EYRYVSRPLP
ALKSLDRNGR VLYSGTFSKV LFPGLRLAYL VVPEDLVERF EHISQTLAGG SPELTQAIVT
AFIKEGHFAR HIQRMRKLYA QRRKATAIGL ETVLGKHMSI ASQPGGMHLI LQLKNQHSDR
LLSARMRESG LYAEALADWT MLSEAPAALL VNFTNIGSQS VAEHLAKRIL QLM