Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_0024 |
Symbol | |
ID | 8011272 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 22950 |
End bp | 24371 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644822615 |
Product | transcriptional regulator, GntR family with aminotransferase domain |
Protein accession | YP_002973875 |
Protein GI | 241202779 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0173306 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTCG CGAAGAGCAA CGACTTCCCG CCACTAGATC CGAACGCAGG CGTGCCTTTC TATCGGCAAA TCTACGATCG GTTCCGCGCC GCCATTGCCT CGGGCCTTTT GAAGCCCGGG GACCGGATAC CCTCGGCGCG GGCGCTGACA AAAGAACTCG GTTTGGCAAG AGGTACGATC GAATCGGCAT ATTCTTTGCT CGCAGCCGAG GGATACATCG AATCACACGG TCAAGCAGGT ACCGTTGTAA CACCGGGCCT CAGTACGCTC ACGCCTGTGC CTGTCCCAGC CCTGCAGCAA ATAAGCAATG CAGCGGAGGT TAGCTTTCGT CCGGATTCCA TTTTGCCGTT TCAGATGGGC TTGCCAGCCC TCGATGCATT TCCTCGGAAG ATCTGGGCGC GGCTGGGCGC GGGATGCGTC CGCGCTATGC AGCCGTCTGA TATGGTCCAT CCTCCAATAT ACGGCCTACC CGCACTGCGA ACGGAGATCG CAACTTACCT GCAGGTTTCG CGAGGAATTG GCTGCTCACC TTCTCAGGTA TTCATAACAT CAGGTTATCG CCACACCATA GAACTGATCG CCGACACTTT GTTGAAGGCA GGAGACCACG TCTGGCTTGA GGATCCGGGG TATCCGCCAA CGCGAGAGAT ATTCAGACAC ATGCAAATCA CGACCGTCCC AGTGCGAGTG GATCAAGACG GGATGGTGAT ATCCGATGGC TTGAAGGCGG CCCATGGCGC TGTTGCAGCC GTTGTGACGC CCGCACACCA AAGTCCACTG GGCATGTCTT TGATTTTGCC GCGGCGATTA GCGCTCCTGG ACTGGGCCGC GAAAAGTAAG TCTTGGATTA TCGAGGACGA CTATGACGGC GAGTACCGCT ACGTTAGTCG TCCGCTGCCC GCGCTAAAGA GCTTGGATCG CAATGGGCGT GTCCTCTATT CCGGCACCTT CAGCAAGGTT CTCTTTCCGG GTCTTCGACT AGCTTATCTT GTCGTCCCGG AAGACCTGGT CGAGCGGTTT GAGCATATCA GCCAAACTTT AGCGGGAGGG AGTCCTGAGC TTACACAAGC CATCGTCACC GCGTTCATCA AAGAGGGGCA CTTCGCGCGT CATATCCAAC GGATGCGAAA ACTTTATGCT CAGCGCAGGA AAGCAACGGC GATAGGCCTC GAGACGGTCC TTGGAAAGCA CATGAGCATT GCCTCCCAAC CGGGTGGGAT GCACTTGATT CTCCAGCTGA AAAACCAGCA CTCAGACCGC TTGCTTTCAG CGCGTATGCG GGAAAGCGGA CTTTACGCGG AGGCCTTGGC CGATTGGACG ATGCTTTCGG AAGCGCCGGC GGCCCTGCTC GTCAACTTCA CGAACATTGG CAGCCAAAGC GTGGCGGAGC ACCTCGCAAA GCGGATATTG CAACTCATGT GA
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Protein sequence | MTVAKSNDFP PLDPNAGVPF YRQIYDRFRA AIASGLLKPG DRIPSARALT KELGLARGTI ESAYSLLAAE GYIESHGQAG TVVTPGLSTL TPVPVPALQQ ISNAAEVSFR PDSILPFQMG LPALDAFPRK IWARLGAGCV RAMQPSDMVH PPIYGLPALR TEIATYLQVS RGIGCSPSQV FITSGYRHTI ELIADTLLKA GDHVWLEDPG YPPTREIFRH MQITTVPVRV DQDGMVISDG LKAAHGAVAA VVTPAHQSPL GMSLILPRRL ALLDWAAKSK SWIIEDDYDG EYRYVSRPLP ALKSLDRNGR VLYSGTFSKV LFPGLRLAYL VVPEDLVERF EHISQTLAGG SPELTQAIVT AFIKEGHFAR HIQRMRKLYA QRRKATAIGL ETVLGKHMSI ASQPGGMHLI LQLKNQHSDR LLSARMRESG LYAEALADWT MLSEAPAALL VNFTNIGSQS VAEHLAKRIL QLM
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