Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_6454 |
Symbol | |
ID | 6983525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011371 |
Strand | - |
Start bp | 117896 |
End bp | 119422 |
Gene Length | 1527 bp |
Protein Length | 508 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643399451 |
Product | polysaccharide biosynthesis protein |
Protein accession | YP_002284207 |
Protein GI | 209552292 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.24308 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGTCGGTAT TACGAGACGA CGACATATTA TTCAGCCATG TGAATGAGAA CCGATCCGCC GCAGCCGTAA CGGGCGCATT CTGGTCGGCG CTGAGTACCT TTATTCCGAC AGTCTTCACC TTCGCAGTTT TTGTGGTGAC TTCACGAGTT CTTCAACCCC AGGATTTTGG TCTTGTCGCG CTGTCATTCA GCATAGTGTC GTTTGCAGGC AGTTTTGGAC CGACTGCATT TGGCGAAGCG ATCATACAGA GAGCTGAAAT AAGACGGAGC CATCTAGACA CCATATTCCT ACTTTCGCTT GTTTTTTCGT TTTTCATCTA TGGGGCTTTG TGTATAGCCG CTTCGCCAAT CGCGGAATAC GTGGGACATG GGGAAATCAG GTATCTGATT TACATCATGG GATTGAAGGT ATTCTTCGAC TTCACGACCA TCGTTCCGAA TGCGATTGTT AATAGGAAGA TGTCATTTCA TTTGGTAGCT GTCCGTACTG TTATAGCTAC CATCACTTCT GCTGGCATTT GCCTTGTTTT AGTTCTCGCG GGTTTTGGCT TGTGGGCGCT TGCGATTGCG CAGATCGCTG CCACAGCGGC ATCGTGCGGC GCTTCTTTCT GGGGTGCGGG GTGGTCGCCC GGACTTCACC TCAAGAGAGC AAGCCTGAAC GACCTCCTTC ACTACGGCTT TTTTGCATCT GGCACTCGGT TTTTACAGAC GATGAGCTTA GACAACCTTA TCATAGGTGT GCTCTTGAGC CCATCAGCGC TCGGTATGTA TAACTTTTCG AAGCGTTTGT TTGATATGAT CAATAACGTT ATCGCCGGGG GCTTAACATC TGTCACGCAC GTCTTACTTT CTTCGTTGCG GTCAGATCCC AAGAAAGTTC GTGAAGCATT CCTAATGGCC ACGTTTGGTT GCTCTTTGGT GTCGTACCCC GTATTTATTG GCCTTGCCGC AGTTGCTGAT GATTTGATCC CCACAGTATT CGGTGGGCAT TGGATTGAGG CTGTTTGGCC CGTTCGGTTC TATTGCGTTA TAGGATTGAT GGCTGGGATC GGCTACGTTC AAGCATCTTT GATAAAAAGC CAAGGCGAGA TGGATTGGTG GTTTTACTAC CAGCTGGCAC GAAATATCCT CACGTTGCTG TCCATCGCAA TTCTCTATCC TTATGGGGTT ACAACAATTG TTTTCGCGAT AATGGTTCAG GTTCTGTTAT TTTGGCCGAT TACTAGCTGG AAAGTTTCGC GGCATATTGA TCTGAGTATC GTGGCATATT TGATGCAATT CCTTCGGCCT AGCATGGCTT CTGCAGGAAT GGTTTCTGTA GTTTTGCTGC TCCATGAAGC GCTAATTCAT TGGTCAACTT ATCCGCGTTT GGCGGTCGAG ATTCTTGCAG GTGCCATTGC CTACGGCTGC CTGATATTTA TCCTATGTAG GCCTCGTTTA AACCTCTTAA TGGGCATTAT AAAGCAGGCA CGGCAGCGCA AAAATAATAA GGGCGCGAGT GTCAGCACTG TAGCACATCG ATCGTGA
|
Protein sequence | MSVLRDDDIL FSHVNENRSA AAVTGAFWSA LSTFIPTVFT FAVFVVTSRV LQPQDFGLVA LSFSIVSFAG SFGPTAFGEA IIQRAEIRRS HLDTIFLLSL VFSFFIYGAL CIAASPIAEY VGHGEIRYLI YIMGLKVFFD FTTIVPNAIV NRKMSFHLVA VRTVIATITS AGICLVLVLA GFGLWALAIA QIAATAASCG ASFWGAGWSP GLHLKRASLN DLLHYGFFAS GTRFLQTMSL DNLIIGVLLS PSALGMYNFS KRLFDMINNV IAGGLTSVTH VLLSSLRSDP KKVREAFLMA TFGCSLVSYP VFIGLAAVAD DLIPTVFGGH WIEAVWPVRF YCVIGLMAGI GYVQASLIKS QGEMDWWFYY QLARNILTLL SIAILYPYGV TTIVFAIMVQ VLLFWPITSW KVSRHIDLSI VAYLMQFLRP SMASAGMVSV VLLLHEALIH WSTYPRLAVE ILAGAIAYGC LIFILCRPRL NLLMGIIKQA RQRKNNKGAS VSTVAHRS
|
| |