Gene Rleg2_6446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_6446 
Symbol 
ID6983517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011371 
Strand
Start bp108066 
End bp109025 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content63% 
IMG OID643399443 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002284199 
Protein GI209552284 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0184678 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.258493 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCAA TCCCTCTTTC CACCCCTGAA ACCGTCGAGG AACAACCGGT CAGCCTGTGG 
CGCGACGCCT GGTATCGGCT GAAGCGCAAC AAGCTCGCGG TCTTCGGTCT CGTCATCGTG
CTGATCCTGG CTTTCACGGC GATCTTCGGG CCTTACCTGA CGCCCTATGA CTATCTCGGC
CAGGACCTCA ACGCCCGCAA CGCGCTGCCG TCGATGAGCC ATCTCTTCGG AACCGACGAT
CTCGGCCGCG ACGTCTTCAG CCGCGTGGTC TTCGGCACGC GGACCGCTTT CCTCGTCGCC
GTGATCGTCA CCTTCTTCGC GGTGTTGATC GGTCTCACGC TGGGTGCGGT CGCCGGTTTC
TTCGGCAATC CCTTCGACCG CGCCATCATG TGGCTGACCG ATGTGACAAT GTCGGTTCCC
AACCTGCTGC TCGTTGTCGT CATCAACGCC TCGCTGAAAT CGCCGATCAC CCGCTGGATG
GAGGCGCGTT ACCTCGAAAC CCTCAATCCC TTCTACCGCC AGACGATATG GGTGGATTTC
ATCCTGGTCT TCGGGTCGAT GGCGCTGATC TCCTGGCCGC CTTATGCCCG CCTGGTGCGC
GCCCAGGTGC TGTCGATCCG CAGCCGGCCC TATATCACCG CGGCCCAGGC GCTCGGCCTG
TCGAACTGGG TCATCATCAA GCGTTATGTC GTGCCGAATG CGCTCGGGCC GCTGATCGTC
TCGGTCAGCG CTGGTCTCGG CACAGCGATG GTTCTGGAAA GCGCCTTCAG CTTCCTCGGC
GTCGGCGTTA ATCCGCCGAC CCCGAGCTGG GGCAACATGA TCTCAGACGG CCTTCGCGTC
TGGCAGCATT ATCCGCATCT TCTCGCCGCT CCGGCGGCCG TGCTCGGCCT TGCCTCGGTT
GCCTTCAGCT TCCTCGGCGA TGGCCTCAAC GACGCGCTCA ATCCGCGGGG CAGCAAATGA
 
Protein sequence
MSAIPLSTPE TVEEQPVSLW RDAWYRLKRN KLAVFGLVIV LILAFTAIFG PYLTPYDYLG 
QDLNARNALP SMSHLFGTDD LGRDVFSRVV FGTRTAFLVA VIVTFFAVLI GLTLGAVAGF
FGNPFDRAIM WLTDVTMSVP NLLLVVVINA SLKSPITRWM EARYLETLNP FYRQTIWVDF
ILVFGSMALI SWPPYARLVR AQVLSIRSRP YITAAQALGL SNWVIIKRYV VPNALGPLIV
SVSAGLGTAM VLESAFSFLG VGVNPPTPSW GNMISDGLRV WQHYPHLLAA PAAVLGLASV
AFSFLGDGLN DALNPRGSK