Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_6212 |
Symbol | |
ID | 6983285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011370 |
Strand | + |
Start bp | 154341 |
End bp | 155174 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643399224 |
Product | Conjugal transfer protein TrbG/VirB9/CagX |
Protein accession | YP_002283980 |
Protein GI | 209552064 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
TIGRFAM ID | [TIGR02781] P-type conjugative transfer protein VirB9 |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0737983 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAGAT GCGCCGCCGC ATTTTCCCTC GTTCTGCTCA TGACCCCAGC AGTCGCTCAT GGCGAGCTCC TGGCACGGCC GGGCCGGCTT GACCCGCGCG TCCGGTCACT TCCCTATTCC GCCGAGCAGG TATTTCTCGT CACCGGCACC TATGGGCTTG TCACGACCAT TCTCTTCGGT ACTGACGAGG AAATCACACA GGTCGTCGCG GGCGACACCG TCTCCTGGCA GATCCTCACT TCGGCCGACA GGCGTTCGTT GACATTGAAG CCGATGGAGA AGGACGCGGC GACCAATCTG TCGGTTGTGA CCACGAAGCG AACCTATTCC TTCGATCTGC GCGTCAACGA CAGCAAGGCG ATGCAGAACC AGACCTTCAA GCTGACATTC ACCTATCCGG AAGATGCCGG CCTGAAAGGA ACTGCCGAGC TCTGGAAACA GGCCCAGGAT GCCGAGCGCA ATCCGAACAT CAAGAACATT CGTCGCGACA AGGTCAATTA CGACTATGGC TTCAAGGGCA ACGATGCCGC CAAGCCCCTG TGGGTCTTCG ACGATGGGGT GAAGACCTTC ATGAAGTTCA CCGGCGACAT CCCGGCGATC TTCATCGTCG ACCCCAAGCG GCGCGAGAGC CTCGTGAACT ATCGTCGGGA GGCCGATTAC ATCGTCATCG ACAAGGTCTC GCGGCAGTGG TCCCTGCGGT ATGGGACCGA GGAGGAGACC TGCCTGTTCA ATCTGCGGAC TTCTCCCGCC GACACCCCGG CGCCCATCGA AGGCGCCGTC GCTCCGAAGC GGATTGGAGC CGGAGCCGCC AACCAGCAAC CCCAATCACG ATAG
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Protein sequence | MKRCAAAFSL VLLMTPAVAH GELLARPGRL DPRVRSLPYS AEQVFLVTGT YGLVTTILFG TDEEITQVVA GDTVSWQILT SADRRSLTLK PMEKDAATNL SVVTTKRTYS FDLRVNDSKA MQNQTFKLTF TYPEDAGLKG TAELWKQAQD AERNPNIKNI RRDKVNYDYG FKGNDAAKPL WVFDDGVKTF MKFTGDIPAI FIVDPKRRES LVNYRREADY IVIDKVSRQW SLRYGTEEET CLFNLRTSPA DTPAPIEGAV APKRIGAGAA NQQPQSR
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