Gene Rleg2_6126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_6126 
Symbol 
ID6983199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011370 
Strand
Start bp58349 
End bp60301 
Gene Length1953 bp 
Protein Length650 aa 
Translation table11 
GC content57% 
IMG OID643399146 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_002283902 
Protein GI209551986 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.375381 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0878449 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTATC TAAAAAGTTT CGGAGTCGCG ACACGATTGT CGGCGGGATT CGGTTTTCTA 
CTTATCTTGA TGGTTGGATT GACAATTTAT TCGGTCACCA AAGTCGACCA GATCAACCGC
GATCTTGCCA CCATTAACGA CGTAAACAGC GTCAAGCAGC GGTATGCCAT CAATTATCGC
GGAAGCGTAC ATGACAGAGC GATCGCCGTT CGTGACGTCA CCCTGGTGAC CACCGAAGCC
GAGCGCAAGC AGACAGAAGC TCTCATCGAG AAGCTCGCCG GGTCGTACGC TGAAAACGAG
AAGCGTATGG CCGATATGGT TGCATCCCCT GTTGGCGCGA CAGAACAGGA AAAGAAGCTT
CTGGCCGAAA TCGCAAGTAT CCAGGCCCAG ACCAATCCGC TCGTGGGCAA GATTACATCA
CTGCAGGACA ACGGTGACAG CGAAGCCGCT CGGAAGGTTC TGCTGGAACA AGCACGCCCG
CTGTTCGTCG CCTGGCTCGG CGCCATCAAC AAGTTCATCG ACTATCAGGA AACGCTGAAC
AAATCCGTCG GCGGCGAGGT CCGCTACACC GCGAGCCGCT TTGCATCTTT GTCATTCGCT
GCATTGGGAA TTGCCGCAGT TCTTTCGCTC ATTGCGGCTG TCCTAGCGGC CCGCTCGATT
CTTGTTCCGC TCTCGAAGCT TCAGCACTCG CTGCAGGGAA TGGCCGAGGG TGACCTCGAA
GCTGACCATG GTCTTGAAGC GCGCACCGAC GAGATTGGCA GCTTGGCGCG CACGGTCGCA
GCGCTCCGGG ATTCGATTTC CGAGAAGGCC GAGCGGGAGG CAAATGCCGA AGCCAAAAGG
GTGATGACTG AACGTCAGAG GCTTGAGCAG GACGCCCAGG AACGCAATAT CCTTGCACAG
CATACGGCCG AGGCGGTCGA TGTACTCGGC GATGCGCTAC AGGCGCTGGC CGCGGGCGAT
CTCACCCGCG AGATCAAAAG CCCCTTTATA ACCTCTCTCG ACAAACTGCG CGTAGATTTC
AACCGGGCTG TGGCCAACCT GCGCGATGCC ATGTCTACAG TGGGCCAAAA TGCCCGTTCA
ATTGCAGCCG GCTCTCAAGA AATCAGGTCG GCAACCGACG ATCTTTCGAA GCGCACCGAA
CAGCAGGCTG CCTCTGTCGA GGAGACCGCG GCTGCACTCG AAGAAATTAC CACAACTGTA
TCTGATTCAA GCAATCGTGC CCAGGAGGCA GGCGAACTGG TTCGCGAGAC CAAGGTGCAT
GCTGAGCGCT CCGGTATCGT CGTACGTGAC GCGGTTGCGG CGATGGGCAA GATCGAGAGG
TCTGCTTCGG AAATTGCGAC AATTATTGGG GTCATTGATG AAATTGCTTT CCAGACCAAC
CTCCTTGCAC TGAACGCGGG GGTCGAAGCC GCGCGCGCGG GTGATGCGGG CAAGGGCTTC
GCAGTGGTTG CACAGGAGGT TCGCGAACTG GCTCAGCGTT CAGCGAAGGC CGCCAAGGAA
ATCAAGGAAC TGATCAATGC CTCCAATGCC CACGTACAGA GAGGTGTTTC ACTCGTTGCC
GAAACTGGCA AGGCCCTGGA TCAGATTGTT GTTCAGGTGC AGCGGGTAGA CGGTAACGTT
GGGGTCATCG TCCAAGCCTC CAGGGAGCAG GCTGTTGGCT TGAAGGAAAT TAATACTGCC
GTAAATACCA TGGATCAAGG CACACAGCAG AACGCGGCTA TGGTGCAGGA GACCACTGCC
GCAGCGCACG GTCTTGCGAA GGAAGCGGAT GTTCTGTTCG AGCTTGTCCG TCGATTCAAG
ATAGAATCCA ATGCTTCCTC CAAGGTGAAC TCAGTAGCGT CACACGTCCG AAATCCTCAG
ACGACGCCCT CCCCCGCCCG CCAAATGCTG GCAAGAGTCG CCGAGTCCTT CAGGGGAAAT
GCAGCATTGG CCAGCGACTG GGAAGCCTTC TGA
 
Protein sequence
MNYLKSFGVA TRLSAGFGFL LILMVGLTIY SVTKVDQINR DLATINDVNS VKQRYAINYR 
GSVHDRAIAV RDVTLVTTEA ERKQTEALIE KLAGSYAENE KRMADMVASP VGATEQEKKL
LAEIASIQAQ TNPLVGKITS LQDNGDSEAA RKVLLEQARP LFVAWLGAIN KFIDYQETLN
KSVGGEVRYT ASRFASLSFA ALGIAAVLSL IAAVLAARSI LVPLSKLQHS LQGMAEGDLE
ADHGLEARTD EIGSLARTVA ALRDSISEKA EREANAEAKR VMTERQRLEQ DAQERNILAQ
HTAEAVDVLG DALQALAAGD LTREIKSPFI TSLDKLRVDF NRAVANLRDA MSTVGQNARS
IAAGSQEIRS ATDDLSKRTE QQAASVEETA AALEEITTTV SDSSNRAQEA GELVRETKVH
AERSGIVVRD AVAAMGKIER SASEIATIIG VIDEIAFQTN LLALNAGVEA ARAGDAGKGF
AVVAQEVREL AQRSAKAAKE IKELINASNA HVQRGVSLVA ETGKALDQIV VQVQRVDGNV
GVIVQASREQ AVGLKEINTA VNTMDQGTQQ NAAMVQETTA AAHGLAKEAD VLFELVRRFK
IESNASSKVN SVASHVRNPQ TTPSPARQML ARVAESFRGN AALASDWEAF