| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_6085 |
|---|
| Symbol | |
|---|
| ID | 6983158 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011370 |
|---|
| Strand | + |
|---|
| Start bp | 11744 |
|---|
| End bp | 12526 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643399111 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_002283867 |
|---|
| Protein GI | 209551951 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAATGA GCCACGCATC AAATCTTGAA CAGGTCCACG CGATCGTCAC CGGCGCCGCT
TCCGGAATCG GCCGTGCCAC CGCAGCCGCG CTTCTTGAGG AGGGCTGGAG TGTCCTTGCC
ATCGACCGGA ACATTGTGGC TCTCGAGGGT CTTCGTCAAG AATTTGCAGG CTCGCAGGCT
CTGTCCATCT ACGGCATTGA TCTTTCGGAG ATCAAAGAGA TCGAGCGGTT TATCGACGAT
CTCCCACATG CAATTCAAAT TCGCGGTCTC GTCTGTTGCG CCGCGCGGGG CGACAAAACA
GGGTTTCTGG ACATCACGAA TGATCAGATC CGCTCCATTT TCGAACTCAA TTTCTTCTCA
ACTTTTTCCC TTTGCCAGGC GGTCGCACGC CGCATGATCA AGGCGGGCGG TGGCTCGATT
GTGAATATTA CATCAACATC AGGTCTGCGA GCTAACGCTG GGCGGTCGGC TTATGGATCG
TCCAAGGCGG CGGTCGAGCT TCTCAGTAAG ATAATGGCCG TGGAACTCGC ACCCTTCAAC
GTGCGTGTGA ACACACTCGC ACCAGGCCCC ACGCTGACGA AAATGGCGGC GCATCTGCAT
GCAGGTCCGG AACGTCAACG GCTGCTCGAT AAAGTTCCGC AGGGGCGATA TGGAATGCCA
GCGGAAATAG CACAGGGCAT TGTGTATCTG CTCGACAGCA AACGCTCGTC CTTCGTGACA
GGTCATACTC TTTGCGTAGA CGGCGGAATG GCCGCCGCCG GAAGCTTCGA GCCAATACGG
TGA
|
|---|
| Protein sequence | MPMSHASNLE QVHAIVTGAA SGIGRATAAA LLEEGWSVLA IDRNIVALEG LRQEFAGSQA
LSIYGIDLSE IKEIERFIDD LPHAIQIRGL VCCAARGDKT GFLDITNDQI RSIFELNFFS
TFSLCQAVAR RMIKAGGGSI VNITSTSGLR ANAGRSAYGS SKAAVELLSK IMAVELAPFN
VRVNTLAPGP TLTKMAAHLH AGPERQRLLD KVPQGRYGMP AEIAQGIVYL LDSKRSSFVT
GHTLCVDGGM AAAGSFEPIR
|
|---|
| |