Gene Rleg2_6000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_6000 
Symbol 
ID6977386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011366 
Strand
Start bp422018 
End bp423217 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content65% 
IMG OID643393452 
Productdrug resistance transporter, Bcr/CflA subfamily 
Protein accessionYP_002278270 
Protein GI209546380 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.923433 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.331381 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCTT CCTTCTTTCG CATGGCCCTC ATTCTCGGCC TGCTCTCGGC CATCGGGCCT 
TTCGCCATCG ACATGTATCT TCCGGCGCTG CCCTCCATCG GGCAGGACCT GCATGCCGAT
AACAACGTCA CCCAGCTGAC ACTTCTCGCT TTCTTCATCT CCTTTGCGCT TGCTCAGCTC
GTCTACGGGC CGCTGTCGGA TATGTGGGGC CGCAAGCTGC CGCTCTATCT CGGCATCGGC
GTCTTTGCCG TCGCTTCGAT CGGCTGCGCG CTCTCGACCA ATATCGAAAC GCTGATCGCC
TTCCGTTTCG TCCAGGGCAT CGGCGGTGCC GCCGGCATGG TCATCCCCCG CGCCATCGTC
CGCGACATGC ATACCGGCGT GCAGGCGGCG CGGCTGATGT CGCTGCTGAT GCTGGTGTTC
TCGATCTCGC CGATCCTCGC GCCGCTGACC GGCAGCGCCG TCATCGAATT CTACGGCTGG
CGCGGCGTGT TCTGGGCGGT GACGATTGCC GCCTTCGTCG GCCTTGTCCT GCTCGCCACC
CAGCTTGAGG AAACCCGGCC GGCCAAGGAG CGCAGCGGCA GCGGCCTCAA GAGCGCCATG
GCGGCCTACC GGCTGCTGCT TTCCGACCGC AATTTCCTGA CGCTGACCTT CATCGGCGGC
CTCGGCATTT CGAGCTTCCT CGTCTATCTC GCCAACTCGC CCTTCGTGCT GATCCAGCAT
TACGGGCTGA CGCCGACCGA ATACAGCTTC GCTTTCTCGA TCAACGCCGT CTCCTTCTTC
GCGGTGTCGC AGGCGACCGG TTGGCTCGGC GAGCGTTTCG GCCTGGTGCG GGTCATGCGG
ATTGCGGTCA GCGCCTTTGC GCTTGCCATG GTCGTCATGG CCGTGGTGAT GGCCTCAGGC
TTCAACCAGC TGCCGGTCAT GGCGAGCTTC CTGTTCATCG GCTACGGCTT CCTCGGCCTC
GTCATTCCGA CGAGCGCGGT GCTGGCGCTC GAGGATCACG GCGCCATCGC CGGCACCGCC
TCGTCGCTGA TGGGCACGCT GCATTTCGTC ATCGCCGCCG TCGCCATGGT GATATCGAGC
CTGTTCTTCG ACGGCACCGC CGTTCCGATG GCCGCCGGTA TCGCGCTCTG CGCCTTCGCG
GCCTTCGTGC TGACCCAGGC AACGATCGGC CGCCGTGCTG CCGTTGCCGC TGCCGAATGA
 
Protein sequence
MTASFFRMAL ILGLLSAIGP FAIDMYLPAL PSIGQDLHAD NNVTQLTLLA FFISFALAQL 
VYGPLSDMWG RKLPLYLGIG VFAVASIGCA LSTNIETLIA FRFVQGIGGA AGMVIPRAIV
RDMHTGVQAA RLMSLLMLVF SISPILAPLT GSAVIEFYGW RGVFWAVTIA AFVGLVLLAT
QLEETRPAKE RSGSGLKSAM AAYRLLLSDR NFLTLTFIGG LGISSFLVYL ANSPFVLIQH
YGLTPTEYSF AFSINAVSFF AVSQATGWLG ERFGLVRVMR IAVSAFALAM VVMAVVMASG
FNQLPVMASF LFIGYGFLGL VIPTSAVLAL EDHGAIAGTA SSLMGTLHFV IAAVAMVISS
LFFDGTAVPM AAGIALCAFA AFVLTQATIG RRAAVAAAE