Gene Rleg2_5973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_5973 
Symbol 
ID6977359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011366 
Strand
Start bp389995 
End bp391167 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content61% 
IMG OID643393425 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002278243 
Protein GI209546353 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.469173 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCCCC TTCCCGCACC CGGCGCGCCG CTTCCCCATT ACGTCTCGAC GGCGCCTTTC 
GATCCGCTGG CGACCGAAAC CATGACGGCG GCGCAATCGC GCATCCATCT CGCCTCGCAG
AAACAGCTGA TGTGGTGGAA GTTCAAGCAG CACAGGCTGG CCTTGACCTC CGGCATCTTT
CTTGCCGCCG TCTACCTGAT GATCCTGATC GTCGAGTTCC TGGCGCCCTA CGGCCTGCAT
ACGCGCAATG TGGATTTCAT CCATGCGCCG CCGCAGCGCG TCCATTTCTT CGACAAGGGT
AATTTCGTCG GTCCCTTCGT CTACGGCCGC AGCATGACGC TCGATCTCGA TACGCTGCAC
CGCGTCTATA ATGACAAGCC CAACGACGTG CAGCCGATCC GTTTCTTCTG CCGCGGCGAT
GCCTATAAGT TCTGGGGTTT TGCCGCCTCG AACTATCATC TGGTCTGCCC GGCGATCGGC
GGGCAGATGT TCCTGCTCGG CACCGACCGG CTCGGCCGCG ACGTTCTCTC GCGCATTCTT
TACGGCGCGC GGATATCGCT GACGATCGGC CTGATCGGCA TTTCGATCAG CTTCGTGCTC
GGCATCGTCA TCGGCGGGCT TGCCGGTTAT TGGGGCGGCA TTTTCGATCT CGTCGTCCAG
CGCCTGATCG AAGTGCTGCA ATCGCTGCCG AGCCTGCCGC TATGGATGGC GCTCGCCGCC
ATCATGCCGG TGACCTGGAG CCCGATCGTC ATCTATTTCG GCATCACCGT CATCCTCGGC
ATCATCGACT GGACGGGCCT GGCCCGCGCC GTGCGCTCCA AGCTTCTGGC GCTGCGCGAG
GAGGATTATG TCCAGGCGGC ACAGCTGATG GGCGCCAGCA CGCCGCGCAT CATCGGCCGG
CATCTGGTGC CGGGCTTCAT GTCGCATCTG ATTGCCTCGG CGACGATCTC GATCCCCGGC
ATGATCCTCG GCGAGACCGC GCTCTCCTTC CTCGGCCTCG GCCTTCGCCC GCCGATCACA
AGCTGGGGCA TTCTGCTGAC CGAGGCAAAA AGCGTCAGCG TCATCGCCTT TTATCCTTGG
CTGCTCTATC CGATCATTCC TGTTGTTCTT GTCATTTTGG CGTTCAACTT TCTGGGAGAC
GGCTTGCGTG ATGCGGCAGA TCCCTACAAA TAG
 
Protein sequence
MSPLPAPGAP LPHYVSTAPF DPLATETMTA AQSRIHLASQ KQLMWWKFKQ HRLALTSGIF 
LAAVYLMILI VEFLAPYGLH TRNVDFIHAP PQRVHFFDKG NFVGPFVYGR SMTLDLDTLH
RVYNDKPNDV QPIRFFCRGD AYKFWGFAAS NYHLVCPAIG GQMFLLGTDR LGRDVLSRIL
YGARISLTIG LIGISISFVL GIVIGGLAGY WGGIFDLVVQ RLIEVLQSLP SLPLWMALAA
IMPVTWSPIV IYFGITVILG IIDWTGLARA VRSKLLALRE EDYVQAAQLM GASTPRIIGR
HLVPGFMSHL IASATISIPG MILGETALSF LGLGLRPPIT SWGILLTEAK SVSVIAFYPW
LLYPIIPVVL VILAFNFLGD GLRDAADPYK