Gene Rleg2_5823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_5823 
Symbol 
ID6977212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011366 
Strand
Start bp233864 
End bp235069 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content62% 
IMG OID643393278 
Productputative branched-chain amino acid ABC transporter, substrate-binding protein 
Protein accessionYP_002278096 
Protein GI209546206 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.281514 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.102648 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAAGA ATCTCGTTGC ATCAGTTGCA TTTCTGCTTG CGAGCAGCAC AGCGGTGCTC 
GCGCAGAGCG CGACCGACGG CAAGGTCAAG ATCGGCATCC TGAACGACCA GTCGGGCGTT
TATGCCGACT TTGGCGGCAA GTCTTCCGTC GAAGCCGCCA AGATGGCGGT CGAGGATTTC
GGCGGCAAGG TACTTGGTGT GCCGGTCGAG ATCGTCGATG CCGACCACCA GAACAAGCCC
GATATTGCCT CCAACATCGC CCGCCAGTGG TATGACACCG AGCAGGTAGA TGCGATCATG
GAGTTGACGA CCTCGTCGGT GGCGCTCGCC GTGCAGGCGA TCGCCAAGGA AAAGAAAAAG
ATCGACATCG TCACCGGTGC GGCGACGACG GATCTCACCG GCAAGGCCTG CTCGCCTTAC
GGCTTCCATT GGGCCTACGA CACCCATGCG CTTGCCGTCG GCACCGGCGG TGCGCTGGTC
AAGCAGGGCG GCGACAGCTG GTTCTTCCTG ACCGCCGACT ATGCTTTCGG CTATTCGCTG
GAGCAGCAGA CCACCGACTA CGTCAAGGCG AGCGGCGGCA CAGTCGTCGG CGCCGTCCGC
CATCCGCTAT CGACCCAGGA CTTCTCGTCC TTCCTGCTGC AGGCACAATC ATCCGGCGCC
AAGGTGATCG GCCTCGCCAA TGCCGGCCTC GATACCTCGA ACGCCATCAA GCAGGCGGCC
GAATTCGGCA TTACCCAGGG CGGCCAGCAT CTGGCGGCGC TGCTCTTCAC GCTCGCCGAA
GTCCATGGTC TCGGCCTCGA GGCGGCGCAG GGGCTGACGC TGACCGAAGG CTTTTATTGG
AACCGCGACG ACGACAGCCG CGCCTTCGCC AAGAAATTCT TCGCCCGCAC CGGCAAGATG
CCCAACATGA TCCATACCGG CACCTATTCG GCGGTGATGC AATATCTGAA GGCGGTGCAG
AAAGCCGGAA CCGACGAGAC GGAAGCCGTC GCCAAACAGC TGCATGAAAT GCCTGTCGAT
GACGTCTTCG GCCGTGGCGG CACGGTCGGC GCCAACGGCC GCATGATCCA CGACATGTAC
CTGCTGCAGG TCAAGAAGCC GGCCGACAGC AAGGAGCCGT GGGACTACTT CAACGTTCTC
GCCACCATTC CCGGCAAGGA AGCCTATATC GACCCCGCCA AGAGCGGCTG CGATCTGGTG
AAGTGA
 
Protein sequence
MRKNLVASVA FLLASSTAVL AQSATDGKVK IGILNDQSGV YADFGGKSSV EAAKMAVEDF 
GGKVLGVPVE IVDADHQNKP DIASNIARQW YDTEQVDAIM ELTTSSVALA VQAIAKEKKK
IDIVTGAATT DLTGKACSPY GFHWAYDTHA LAVGTGGALV KQGGDSWFFL TADYAFGYSL
EQQTTDYVKA SGGTVVGAVR HPLSTQDFSS FLLQAQSSGA KVIGLANAGL DTSNAIKQAA
EFGITQGGQH LAALLFTLAE VHGLGLEAAQ GLTLTEGFYW NRDDDSRAFA KKFFARTGKM
PNMIHTGTYS AVMQYLKAVQ KAGTDETEAV AKQLHEMPVD DVFGRGGTVG ANGRMIHDMY
LLQVKKPADS KEPWDYFNVL ATIPGKEAYI DPAKSGCDLV K