Gene Rleg2_5804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_5804 
Symbol 
ID6977193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011366 
Strand
Start bp213669 
End bp214538 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content67% 
IMG OID643393259 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002278077 
Protein GI209546187 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.195076 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.122918 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAGA AAAAATGGCT GGCCGATCAA TTCGAGGCGA ACCGGGCGCA TCTGCGGGCG 
GCGGCCTATC GCATGCTCGG CTCGCGCAGC GAGGCTGAAG ACGCCGTCCA GGAGGCCTGG
CTGCGGCTCA ACCGCGCGGA TACGACTGAC ATCGGCAATC TCGGCGGCTG GCTGACGACG
GTGGTGGCGC GCATCTGCCT CGACATGCTG CGGGCCCGCA AGACCCGGCG CGAGCAGCCG
CTGGAGATGC CGGTCCATGC CGCGATTGCC GATCCGGCAC ATGATCCGGA GCGCGATGCG
GCCTTCGCCG AATCGGTCGG CGTGGCCTTG CTCGTCGTGC TGCAGACGCT GGCGCCGGCC
GAGCGGGTCG CCTTCGTGCT GCATGACATG TTCGATCTGC CTTTTGACGA GATCGCGCCG
ATCATCGGCC GCACGTCCGC CGCCGCCCGG CAGCTCGCAA GCCGCGCCCG CCGCCGCGTG
CAGGGCACGG ACGAGGCGCC CGATGTTGAT TTCGGCCGCA AGCGGACGAT CGCGGAAGCC
TTCCTGACGG CATCGCGCAT CGGCGATCTC GAGGCCTTGC TTGCCGTGCT TGCTCCCGAT
GTCGTCTTCC GGCCGGATGC GACGGCAGCG CGATTCGGTC CATTTGGCGG AAGGCGCGGC
GCGTCCGAGG TCGCAGAGCT GTTCAAGGGC CGGGCACAGG CGGCGGAAGC CGCGCTCGTC
GACGGCGAAG TCGGATTCAT CGTCCGCATC AAGGGCGAAC TGCGCGTCGT CGTGACGCTG
ACCATCGTCG ATGGGAAGGT GACGGTGATC GAAGCCTTCG CCGATCCGGA TTATCTCGAA
CACGTCGACT ATTCCGTGCT TTCCAGCTGA
 
Protein sequence
MNEKKWLADQ FEANRAHLRA AAYRMLGSRS EAEDAVQEAW LRLNRADTTD IGNLGGWLTT 
VVARICLDML RARKTRREQP LEMPVHAAIA DPAHDPERDA AFAESVGVAL LVVLQTLAPA
ERVAFVLHDM FDLPFDEIAP IIGRTSAAAR QLASRARRRV QGTDEAPDVD FGRKRTIAEA
FLTASRIGDL EALLAVLAPD VVFRPDATAA RFGPFGGRRG ASEVAELFKG RAQAAEAALV
DGEVGFIVRI KGELRVVVTL TIVDGKVTVI EAFADPDYLE HVDYSVLSS