Gene Rleg2_5796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_5796 
Symbol 
ID6977185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011366 
Strand
Start bp204765 
End bp205388 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content65% 
IMG OID643393251 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002278069 
Protein GI209546179 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0048122 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTCAAGGA CTACGTCCGC AAAAAAATCA GAAACTTCGA ATGAAATCTC CGCAGCCGTT 
CCAGAAGATC GCATCCCGCC GCGGGAACGT ATCGTCTCGA CTGCGTCGGA GCTTTTCCGC
GAGCGCGGCA TCCGCGGCAT CGGCGTCGAT GCCATTGCCG ACGCGGCGCT GACCAACAAG
ATGACGCTCT ACCGGCATTT CGGCTCGAAG GACGAGCTCG TCTGCGAGAC GCTGCGCCGC
GCCTCGGAAA AGGCGGGTGC GATCTGGCGC GAGCTGGAGG CGGCCTATCC CGGTAATCCG
CGCGCTCAGC TCTACGCCTG GGTGGAGATG CGGGCGCAAT GTCTGAACGG CGAGCCCGCC
GGCTGCGATC TCGCCAATGC CGCCATCGAG CTGAAGGGCG AGGGCCATCC CGCCCACGAG
ATGATCGAGC GCCACAAGGC CGAACAGCGC GATCGCCTGG CCGCGCTCTG TTCGGCGGCC
GATGCGCGCG AGCCTGAGCT TCTTGCCGAT ACGCTGACGC TGCTGCTCGA AGGTGCGCGC
GTCAGCCGCC AGGCGATGGG CGCTGCCAGC TGCTGCGGTC ATTTCGCCAA GGCCTGCAAT
GCGGCGATCG CCTCTTTCGC CTGA
 
Protein sequence
MSRTTSAKKS ETSNEISAAV PEDRIPPRER IVSTASELFR ERGIRGIGVD AIADAALTNK 
MTLYRHFGSK DELVCETLRR ASEKAGAIWR ELEAAYPGNP RAQLYAWVEM RAQCLNGEPA
GCDLANAAIE LKGEGHPAHE MIERHKAEQR DRLAALCSAA DAREPELLAD TLTLLLEGAR
VSRQAMGAAS CCGHFAKACN AAIASFA