Gene Rleg2_5787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_5787 
Symbol 
ID6977176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011366 
Strand
Start bp197454 
End bp198248 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content67% 
IMG OID643393242 
ProductHpcH/HpaI aldolase 
Protein accessionYP_002278060 
Protein GI209546170 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0389238 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAGCAG CTGACATAGA CGGCTTTGCG AACCGGATCA GGGGCAGCCG GTGCGGGATG 
ATCTCCGCCT GGGTCGGCAT TCCCGACGCC ATGTTGGTCA ACCATCTGGC GCAGGAGGCC
TTCGATGCCG TCGTGCTGGA TATGCAGCAC GGCATGTGGG ACATGCCGTC GGCGGCCAAT
GGCATCGCGC AGGCGCGTCT GGCCGGCAAG CCGGCCCTGG CGCGCATCCC GGTCGGCGAC
TTCGCTTCCG CCTCGCGGCT GCTCGACGCC GGCGCCTCCG GCATCATCGC GCCGATGATC
AATTCGGCTG ACGATGCGAG AGCCCTGGCC CGGACGACGA AATATCCGCC CGTCGGCGAG
CGCAGCTGGG GGCCGTCGCT GGCGCTGAAC CATACCGGCC TGTCGGGCGA TGATTATTTG
AAGAACGCCA ATGCGCTCAC CGTCGCCATC GCCATGATCG AGACCCGCGC CGCGCTCGAT
GCGATCGACG GCATTCTCGG CGTGACCGGC ATTGACGGCA TTTTCATCGG CCCTTCCGAT
CTTTCGATTG CGCTGTCGAA CGGTGATCAA GTGGCGCCGA ACGCTGCCGA AATCGACAGC
GCCATGCAGC ATGCCGTCGC GCGCTGCCGC GCCCATGGCA AGTTCGCCTG CGCCTTTGCC
GCCGACGGCG AGCGGGCCGG CGAACTGTTG AAATTCGGCT TCGACCTGGT CGTTGCCGGC
GCCGAGACCA CGCAGCTGCG CTCCGGCGCC CGCCGCGCCA TCAATGCCGC CCGCAGGATC
GCTTCAGCCG GTTGA
 
Protein sequence
MGAADIDGFA NRIRGSRCGM ISAWVGIPDA MLVNHLAQEA FDAVVLDMQH GMWDMPSAAN 
GIAQARLAGK PALARIPVGD FASASRLLDA GASGIIAPMI NSADDARALA RTTKYPPVGE
RSWGPSLALN HTGLSGDDYL KNANALTVAI AMIETRAALD AIDGILGVTG IDGIFIGPSD
LSIALSNGDQ VAPNAAEIDS AMQHAVARCR AHGKFACAFA ADGERAGELL KFGFDLVVAG
AETTQLRSGA RRAINAARRI ASAG