| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_5762 |
|---|
| Symbol | |
|---|
| ID | 6977152 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011366 |
|---|
| Strand | - |
|---|
| Start bp | 166849 |
|---|
| End bp | 167790 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643393218 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002278036 |
|---|
| Protein GI | 209546146 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0000799384 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGCT ACATCCTCCA GCGCTTCTTT GGCATGATCG TCGTGATGTT TCTCGTCGTC
ACGATCGTCT TCGTCATCGT GCGAGTGACG CCGGGCGACC CGGCCCCCGT CATGCTCGGG
CCGGATGCGA CGCCGCAGGA TATTGCCGAT CTCCGCGCCC GGCTCGGGCT CGATCAGTCA
CTCGGCCTGC AATATCTCTA TTATATCGGC CAGCTGCTGA AGGGCGATCT CGGCCAGTCG
ATCTTCCTCA ACATGCCGGT GACCTCGGCT CTGCTCGACC GCGCCGAGCC GACCTTCTTC
CTGACGCTGT TTTCGCTTGC CATCGCCAGC ATCATCGCCT TGCCGATCGG CATCTATGCC
GCCTATCGGC GCGGCTCCTT CGTCGACCAG GCGGCAACGA CGCTGGCGAT GTTTGCCGCC
AGCATCCCAA GCTTCTGGCT CGGCCTCATC CTGATGCAGT TCTTCGCCGT CCGGCTCAAT
CTCTTCCCGG TCTCGGGTTA TGGCGGCCCC GGCTCGACCT TCGCGGACCG CATGTATCAT
CTGACACTGC CGGCCTTTGC GCTCGGCATC GTCTCCTCGG CGCTGATCCT GCGCTTCACC
CGCGCCTCGA TGCTCGATGT GCTCGGCGAC GATTATATCC GCACGGCGCG CGCCAAGGGG
CTGGTCGAGC GCAAGGTGAT CCTCAAGCAC GCGCTGAAGA ATGCGCTGAT CCCGATCCTG
ACCGTACTCG GCCTGACGGC GGCGGTGCTG ATCTCAGGCG CCGTCGTCAC CGAAACCGTT
TTCGGCCTGC CGGGCGTCGG CAATCTCGTC GTCTCGGCGG TGCTGCGCCG CGACTATCCC
GTCATCCAGG GGGCGCTGCT CGTCATCGCC GCCCTCTACG TGCTGATCAA TTTTGCGATC
GACATGCTCT ATCTGCTGGT CGATCCGAGG GTGCGCTACT GA
|
|---|
| Protein sequence | MIRYILQRFF GMIVVMFLVV TIVFVIVRVT PGDPAPVMLG PDATPQDIAD LRARLGLDQS
LGLQYLYYIG QLLKGDLGQS IFLNMPVTSA LLDRAEPTFF LTLFSLAIAS IIALPIGIYA
AYRRGSFVDQ AATTLAMFAA SIPSFWLGLI LMQFFAVRLN LFPVSGYGGP GSTFADRMYH
LTLPAFALGI VSSALILRFT RASMLDVLGD DYIRTARAKG LVERKVILKH ALKNALIPIL
TVLGLTAAVL ISGAVVTETV FGLPGVGNLV VSAVLRRDYP VIQGALLVIA ALYVLINFAI
DMLYLLVDPR VRY
|
|---|
| |