Gene Rleg2_5475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_5475 
Symbol 
ID6978569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011368 
Strand
Start bp1122337 
End bp1123275 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content54% 
IMG OID643394575 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002279393 
Protein GI209547475 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.44322 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCATT CCGCTCCGGC TCTGGTGGCT GCGCAAGTCA ACGCGCGGAA GAAAAGATGG 
CTTCGTTACA GCACCTTGAG GAAGCTGGTG CCGTATTTCT ACGTGTCGCC GGCGACCTTT
TTGCTTGTCC TGCTGATGCT GTTCCCGATG GTGATGGTCT TCAAATATTC ACTGATGGAC
GGCGCCATCA TGAAAAAGGA CGCTGCATTC GCGGGCGTCC AGAATTACCT GACCATCTTC
GAAAATCCGG TCTTCTGGCA GTCGGTCGGC CAGACGATGT ATTTCACGAT CATGAGCGTC
GTCTTCCACT TCATCATCGG CCTGGCTTTC GCGCTGCTGC TGAATACCAA CCGCGTCGAT
CCACTGATCA GGAGCATATT ACGTGTGCTC TTCATTCTAC CGTGGCTGTT CACCGCCGTC
ATCATCGCCA TCATCTGGCG TTTGCTGCTC GACCCGAACG GCGTCGTCAA CAGCGTGCTG
ATGGCGCTTC ATATCATCAA CTTCAAAGTC GAGTGGTTCT CCTCGACCCG CACCGCCATT
CACGCCCTGA CCTTTGCAAA CATCTGGGCG GGTTATCCGC TCTACATGGT CAGCCTGCTT
GCCGGTCTTC AAGGCATTTC GAAGGAGCTT TACGAGGCAG CCGGGATCGA TGGCGCCAAC
GAACTGGAAA AATTCTGGTA CATCACCATT CCGCAGCTGA TGCCGATCAT CATCAGCATC
GCGCTTCTCG ACTTCATCTG GACGATGCAG GTTTTTCCGC TCGTGTGGAT GACGACGGGC
GGCGGTCCGA TTTATTCGAC GGAAGTGCTC TCCACCTTCA CCTACAAACT CGCCTTCTCC
CAATATGAAT TTTCGCTGGC TTCGGCGAGC GCAATGATCA TCCTCATCAT TTCGATGAGC
GTTACCTACT TCTACATCAA ACACCAGCAG CGCAGGTGA
 
Protein sequence
MNHSAPALVA AQVNARKKRW LRYSTLRKLV PYFYVSPATF LLVLLMLFPM VMVFKYSLMD 
GAIMKKDAAF AGVQNYLTIF ENPVFWQSVG QTMYFTIMSV VFHFIIGLAF ALLLNTNRVD
PLIRSILRVL FILPWLFTAV IIAIIWRLLL DPNGVVNSVL MALHIINFKV EWFSSTRTAI
HALTFANIWA GYPLYMVSLL AGLQGISKEL YEAAGIDGAN ELEKFWYITI PQLMPIIISI
ALLDFIWTMQ VFPLVWMTTG GGPIYSTEVL STFTYKLAFS QYEFSLASAS AMIILIISMS
VTYFYIKHQQ RR