Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_5450 |
Symbol | |
ID | 6978544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011368 |
Strand | + |
Start bp | 1094257 |
End bp | 1096008 |
Gene Length | 1752 bp |
Protein Length | 583 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643394551 |
Product | ABC transporter related |
Protein accession | YP_002279369 |
Protein GI | 209547451 |
COG category | [R] General function prediction only |
COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0152019 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGATA TCGTTCCCAT TGCCGGCAGG CCGCTGCTCG AGGTGAAGAA CCTCACCGTC GAATTTCCGC TGCGCACCGG CGTCTTTCGC GCCGTCAGCG ATCTGTCTTT CTCGATCGAG CCGGGCAAGA CGCTCTGCGT CGTCGGCGAA AGCGGATCCG GCAAGTCGGT GACGGCGCGT TCAATCCTGC AGATCGTTGA TGCACCCGGC CGGATTGCGG CCGGATCGAT CATCCTGAAC GACCAGAACG GCGGCTCGAC CAATCTGACC AGCCTCAATC CGCGAGGGCG CCAGATCCGG GCGATCCGCG GCCGCGACAT CGCCATGATC TTCCAGGAGC CGATGTCGTC GCTGTCGCCG ATCCACACGG TCGGCAACCA GATCGTCGAG GCGCTTCGCC TCCACACCCG GATGAGCAAG GCGGAGGCGC GCGCTGAGGC CATATCGCTG CTGAAGCAGG TCGAGATTCC CGCGCCGGAA AAGGCGCTGG ATCGCTATGC CTTCCAATAT TCCGGTGGCA TGCGCCAGCG CGCGATGATC GCCATGGCGC TCGCCTGCAA ACCGCAATTG CTGATCGCCG ACGAGCCGAC CACGGCGCTC GACGTGACGA CGCAGGCCGA AATTCTCGAC CTGATCGCCC GCCTGCAGAA GGCCAACGGC ATGGCCGTTC TGTTCATCAC GCACGACATG GGCGTGGTGG CGCAGATCGC CGACGATGTG CTCGTCATGC ATAACGGCGT CGCCAAGGAA TATGGGCCGG TCGAGCAGAT CTTTCATGCG CCGCAAGACG ACTATACCCG CATGCTGATC GGCTCGGTGC TCAAGCTGGA GCAGAAGGCC GAAATCCGCC TCGCACGTCC CCCGCTCGAC AGGACAAAGG CGCCGATCCT CGAACTGCGC AACGTTTCGA TGGATTTCGG CGAAGTGAAA GCGCTGGACG ATGTTTCCAT TTCGCTGCTG CCGGGCGAGA CACTCGGCAT CGTCGGCGAA AGCGGATCCG GCAAGACGAC GATGGGCCGC TCTATCATGC GGCTGATCGA TCCCACCGCC GGCGAAATCC TCTATCGCAA TGCCGGCGGC GACATCATCG ATCTGGCAAC GGCAAAGGGT CAGACGCTGG CTGCGGCACG CCGCGAATTG CGCATGGTGT TTCAGGACCC GTTCGGCTCC CTCAATCCGC GCATGACCGT CTCCCAGATC ATCGGTGAGC CGTTGCTCGT CAACGGTGTC GCCAAAGGGC GGGCGCTGGA GGAGCGTGTC TGCCACCTCA TGGAACAGGT GGGCCTCGAT CCGAGGGCGC GCGAACGCTA CCCGCACGCA TTCTCCGGCG GTCAGCGCCA GCGCATCGGT ATTGCCCGCG CCATCACGCT CAATCCGCGT GTGATCGTCG CCGACGAAGC GACCTCGGCG CTCGACGTCT CGGTGCGCTC GCAGGTGCTC GATCTCCTGA TGCGCCTGCA GGACGAGCTT GGCCTCGCCT ACATCTTCAT CAGCCATGAC ATCGGCGTCA TCCGCTACAT GTGCGACCGT GTCGGCGTCA TGTACAAAGG CCAGCTCGTC GAAATCGGCG AGGCGGAGCA GGTCTGCCGC ACACCCGAGC ATGCCTACAC GCAGGCGCTG ATATCGGCGA TCCCGCGCCC CGATCCGCGT GACCGCGATC ACTCCAGGCG TTTCCGCTAT GTCGCGCCCG TCAATTTGGA GCCTGGCAAT CTGAAGCCCG ATCATCTGAA GAATGGAAGT TCTCAGAGAT GA
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Protein sequence | MTDIVPIAGR PLLEVKNLTV EFPLRTGVFR AVSDLSFSIE PGKTLCVVGE SGSGKSVTAR SILQIVDAPG RIAAGSIILN DQNGGSTNLT SLNPRGRQIR AIRGRDIAMI FQEPMSSLSP IHTVGNQIVE ALRLHTRMSK AEARAEAISL LKQVEIPAPE KALDRYAFQY SGGMRQRAMI AMALACKPQL LIADEPTTAL DVTTQAEILD LIARLQKANG MAVLFITHDM GVVAQIADDV LVMHNGVAKE YGPVEQIFHA PQDDYTRMLI GSVLKLEQKA EIRLARPPLD RTKAPILELR NVSMDFGEVK ALDDVSISLL PGETLGIVGE SGSGKTTMGR SIMRLIDPTA GEILYRNAGG DIIDLATAKG QTLAAARREL RMVFQDPFGS LNPRMTVSQI IGEPLLVNGV AKGRALEERV CHLMEQVGLD PRARERYPHA FSGGQRQRIG IARAITLNPR VIVADEATSA LDVSVRSQVL DLLMRLQDEL GLAYIFISHD IGVIRYMCDR VGVMYKGQLV EIGEAEQVCR TPEHAYTQAL ISAIPRPDPR DRDHSRRFRY VAPVNLEPGN LKPDHLKNGS SQR
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