Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_5436 |
Symbol | |
ID | 6978530 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011368 |
Strand | - |
Start bp | 1077149 |
End bp | 1080028 |
Gene Length | 2880 bp |
Protein Length | 959 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643394537 |
Product | transcriptional regulator, LuxR family |
Protein accession | YP_002279355 |
Protein GI | 209547437 |
COG category | [R] General function prediction only |
COG ID | [COG3899] Predicted ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00800009 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGTCGACAT CCCTCAAGAA GTCCCTGTTC TCAGGCCGTG CAGCAGAACT CGATGCGATG GAATCCGCGT TCCGGGACGT TTACGGCGGC CGGCAACGCT CCATTCTTCT CGGGGCGGAA GCAGGCGGTG GCAAGAGCCG GCTGGTCGAG GAGTTTGCCG ATCGACTGTC AGGCTGTGCG CTGATCCTGA AGGGCGGCTG CATCGAGCAG CGAGAATCGG CATTGCCCTA TGCGCCGGTC ACCGCCGTGC TGCATGAACT GGTTCAACTG CGCGGTGGGA CGGCGGCCCG ATCGCTTGTC GGCGCCGCGA GTGCGCGCGA ACTGGCTTGG CTTCTTCCCG AATTCGGCGA AACCTCTGAA CGGTTTGATG CGGGCATCGC AAGAGCGAGG CTGTTCGAGG CGTTGAGGAA GCTGTTCGAA GAGCTCGCCC GGGAGATGCC GCTCGTCGTG GTCGTCGAAG ACATTCACTG GGCCGACCAG GCCACTTGCG ATCTGCTTCG TTTCCTCACG ACGCGGCTGA AGAAAAGTCG GATGATGCTG ATCGTCACCT ACCGACCTGA GGAGACCAGC GGCAGCAACG CGCTGCGAAC GACCATCGCG GACCTCTCGC TGTCCGAGGG TGCCGAGATG CTGAAGCTTC CCCGCCTCAA GCGCGCCGAA GTCGCCGCGC AGCTCGAGGG GCTGCTCGGG CGCCCGCCGA CACCCGCCGT CATCAATGAG GTCCATGCGC GATGCTGCGG GATCCCGCTT TTCACGGAGG CGCTTATCGA TGCGAGCGGA AGCTTGCGTA CTGATTTTCC CGGCTCGCTC AACGACTACC TGCTGAAAGG CGTCAGGGAG ATACCGGCGT CGACGGCCGG CCTGTTGAAG GTGATGGCAC TTGGCGGTCC GCATATTGCG CATGCGCTTC TTCGCAGCGT GGCGGATAAG TCCGACCTTG AATTAGCCGA ATTGCTGAAG CCCGCAATTT TGACCGGGAT CCTGGTGCCG GATGGCGACG GATATGCGTT CCGCCATGCG CTGATCCACG AAGCGGTGCG GGGTGACCTG ATTGCCGGCG AAAGGATGGC CATCCATCGC GCCTATGCCG AAGTGCTCGA ACGCGGCCCG CTTCCGAGCT ACCGGGTTTG GCATTCCGTT GCGCTCGCCC GCCACTGGCA CGGCGCCGGC CAAGCCGAAC CTTGCCTGCG ATGGGCGTGG CAATCCGCCG TGGAAGCTGC TGCCACCTTC GCCTATGCAG ACCAGATGGA GATGCTGAAG CTCGTGCTGG CAGCCTGGCC CGATGTCGAT CATGCGGCTG ACCTGATCGG CGCAGATCAT TGCAGGGTGT TGGAACTTGC TGCCGATGCC GCTTGCTGGG CGGCGGAAGC CGAACAGGGA CTGGCTTTTG TCGAACGCGC TCTCGCCGAA GTGGATGCCG AGCGCGACGG TGAGCAGCTG GCAGCCCTTC TTCTGCAGCG CGCGGTGATG CGTCAGCACA CGCTTACCCC AGGTGAGATC GCCGATCTTG AGCGAGCGCT CGATCACGCG GTCGCTCCCA CCAGGCTGCG CGCGGACGGA CTGGGGCAGT TTTCCCGCGC GCTGATATTG CGGGGAGAAT TCGATCGCGC CAGGCTCTTG GGCGACGAGT TAAAGGACCT GTCGGAGAGG CTCGATGACG AGGAATACCG CATCGAGGCA CTGATCGTCG CGGCGTCCGT GGACATGGCC GCGGGCAACT CTCGCATCGA CGCCTTCTGG AACGTGGCTA AGCGCGCCGG TCAGGCATCC ATCGGCCGGG TCGAGGTGCT GGCGGGCGCA GCCCTGCTTC AAGCCCTGCT CGAGACAGGA GACTACGCTC AGATCATCGA CATCGGACCG GCGATCTTTG CCCAGACCGT CGAATTCGGC CAGGCCCGGT ATATCGGGGC AATCGTGGGT TCGCCCTTGT GCCGCGCCCT GCTCGCCGTC GGCCGCGTTT CCGAAGCCGT TGAGACATGC GAACGGATGG CGGCATTGGA TCCGCTGCCG CTGGGGCTGG TTCATGTTTT CGAGTGTCAG GCGGAGATCG CCCTGGTCCT GGGGGATTCG GATCGCGTTG CCGCAGCGGC AAGCGCCTCG CGCGCTCTGC CACCCGGCCC CCAGGTCGCG GGCCGCATGA CGGCCAATCT TTTGCGGTTC GACCTCGAAA GCACCGCGCT GGCGGGCGAT ATGGATCAAT CTGCGATCCT GATAAGATCG GCTTCGACCC AGTTGGAGAA GCAAGGAGGC GTCTCCTGGC CGCTCTTGGC CTCTGCCATG CGTGTCGCCA TCGACACGAA CCGGAAAGAT GTCGCCCAGC AGCTCGCGGA CCTCGCCGCT CGGACCCCGT GCCGCAACGT GGTGGAGCAA GCCGAGAGGC TTACTGTCTC GGCCGAGATG TCGCGCGCGA CGGTTTCCGA CCTCGATGCC TGGGAAGCGG CTGCCCAAAG TTGGGCTGAT TTGAGCCAGC CCTTTCGGCA GGCATATGCC CTGATGCAGG CCGGGAGCGC TGCAGTGAAT GCCGGCAAGC GCGCCAGGGG TGCAGACCAT TTCGGGCGAG CTGCGGATCT TGCCCATTCG ATCGGCGCGC GCCTGCTTGC CAATCAAATC GAGACGCTGG CCGCAAAGGC CCGCATTGAT CTGCGAGGCG GGAAAGAGGG CAGCACGCCG AAGGCGAAGC TTGGCCTGAC GGACCGGGAA TTCGAGGTGC TCAGGCTTGT CGCCGCCGGA CAAAGCAATC GCGAGATCGC CGATAATCTG TTCATCTCGT CGAAAACGGC GAGCGTTCAT GTCTCCAACA TCTTGAGCAA ACTCGCCGTC CCCAGCCGCG GTGCTGCGGC CGCCATGGCC CACCGGCTCC GGATCGTTGA TCCGGCATAG
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Protein sequence | MSTSLKKSLF SGRAAELDAM ESAFRDVYGG RQRSILLGAE AGGGKSRLVE EFADRLSGCA LILKGGCIEQ RESALPYAPV TAVLHELVQL RGGTAARSLV GAASARELAW LLPEFGETSE RFDAGIARAR LFEALRKLFE ELAREMPLVV VVEDIHWADQ ATCDLLRFLT TRLKKSRMML IVTYRPEETS GSNALRTTIA DLSLSEGAEM LKLPRLKRAE VAAQLEGLLG RPPTPAVINE VHARCCGIPL FTEALIDASG SLRTDFPGSL NDYLLKGVRE IPASTAGLLK VMALGGPHIA HALLRSVADK SDLELAELLK PAILTGILVP DGDGYAFRHA LIHEAVRGDL IAGERMAIHR AYAEVLERGP LPSYRVWHSV ALARHWHGAG QAEPCLRWAW QSAVEAAATF AYADQMEMLK LVLAAWPDVD HAADLIGADH CRVLELAADA ACWAAEAEQG LAFVERALAE VDAERDGEQL AALLLQRAVM RQHTLTPGEI ADLERALDHA VAPTRLRADG LGQFSRALIL RGEFDRARLL GDELKDLSER LDDEEYRIEA LIVAASVDMA AGNSRIDAFW NVAKRAGQAS IGRVEVLAGA ALLQALLETG DYAQIIDIGP AIFAQTVEFG QARYIGAIVG SPLCRALLAV GRVSEAVETC ERMAALDPLP LGLVHVFECQ AEIALVLGDS DRVAAAASAS RALPPGPQVA GRMTANLLRF DLESTALAGD MDQSAILIRS ASTQLEKQGG VSWPLLASAM RVAIDTNRKD VAQQLADLAA RTPCRNVVEQ AERLTVSAEM SRATVSDLDA WEAAAQSWAD LSQPFRQAYA LMQAGSAAVN AGKRARGADH FGRAADLAHS IGARLLANQI ETLAAKARID LRGGKEGSTP KAKLGLTDRE FEVLRLVAAG QSNREIADNL FISSKTASVH VSNILSKLAV PSRGAAAAMA HRLRIVDPA
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