Gene Rleg2_5296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_5296 
Symbol 
ID6978390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011368 
Strand
Start bp921935 
End bp924472 
Gene Length2538 bp 
Protein Length845 aa 
Translation table11 
GC content62% 
IMG OID643394400 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_002279218 
Protein GI209547300 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.706556 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0870205 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTTGA TTGACCGACT GTTGCAGCGG ATGCGGATCG TGACGAAGGT ACTCTTCTTC 
GTCGTGCCGC TGATCGTTCT CATCGCCGGC ATCGGTCTTT TCGGTTATTT CACCGCCGGC
ACGCTCAATG GCCAGATGAC ACTGACGCGG CAGACGATCG ATACGCTTTC CAGTTTTCAG
CAACTGCGAT CCTCGCTGAC CGCCTTTACC GATCTTCCGG CAGCGGCCAC GCGCGATCGA
TTGATCGCCA GCATCTCCGA TCAGCAGAAG GGTGCGGCGA CGCTCGATGC CATGTTGATC
GATCCGGCGC AGAAGCAGCA GATTGCTGCG GTGCGCGAAC TCGGGGCTAA GATGCAGGGC
GGTGCCGACG CGCTTTGGGC CGTGTCGCAG GAGCGCGTCA ATACCGAACA GGCGATCGAC
GACGCAGTGG CCGGACTGTT TAAGGAAAGC CAGACGGCGC GCAAACAGCT CGATGTCCTT
CAGGATCAAG CGAATAGCAA GGAGGCCTTC GTCCGGGCGC TGCTTCTCGA TGCCTCGGCC
TATAAGAATC TCGCGGGACG CATTGCCAAA CTGCGCAAGG CGACCGCAGC GGCAGCCGAC
CCTCAGAAGC TCGGCCAGGC CATCGGCAGC CTTCTGCCGC CGCTCGTCAA AGAGGTCGGC
GACAGCGGGG CGCTTGCCTC CGACAAGGCC CAGAGCCAGA TCGCTGCGCT GAAGCCGGTC
CTGGACAAGC TCGCCCCCAT GGCCAAGGAC AGCAGCCTGA CGCTCGAAGC TTACGCTCCG
GTCGATCAAG ATCTGCAGGG CCTGCAGGAG CAATTTGCAA AACTCGCCTC CGGCAATGCG
GACACGGCGA TCGAGCGCTT TACCGGCATG GATGCCAGCA TCTCAACGCT TCGTTCGATG
GTGGCGATCG TCAATGCCGC TTTCAAATCG ATCGACGATC TGCGCCTGCA CCTGAGCGAA
CTGAACAGGC GGGTGGATGC AGAGTCGCGG GATGCGGTTC TCGCGGATCT TAAGGCATTG
CGCGAAAGCG CTGCAAAGCT TGTCCCCTTG AGCGGTAAAA ATGCCGCGCT GCAGGATCTT
GCCAAGAAGA TCGAGCCATC CCTTGCGACG ATCGAGAAAG ACACGTCGCT TCTGATCTCG
ATCGCCGACC GGTGGCGCGC GGACAAGGAG GCGGCGACCG CACTTGTGGC CGACGCAAGC
CACACGCTCG AACAGTTTGT CAGCACGGCG CAGGAGAGCG GCAAGGAAAT CAGCCAGCGC
TCGGCGACGA TGTCGCTCGC GGCGATGATT GCGGGCACCG TGCTTGCGAT CATCGGCGGC
CTCATGCTGA TCGAAACTCT GCGCGGGCCG CTGAAGCGGA TCACCCAGAC GATGATGCGG
CTTGCCGCCG GCGATCTGAA TGTTGCCATC GGCGACGGCA AGCGCGGCGA CGAGATCGGC
GACATGATCC GATCGGTGAC GGTCTTCCGC GACCAGGCGC TCGAAAAGAC CAGGCTCGAA
GAGGTGGCCG AGACAAACAG GGCGCGGGAC GAACGGGAAC AGGCCCGCCG CGCCGCCGAG
CAGGCACGCA TCGAGGCGGA ACAGAGCGAG GCTCTGACGG CGCTGTCGGA AATGCTGGGC
AAGCTTGCCA ATGGCAACCT CGCAGCCGAG ATGAGCGAGG ATCTGGCCGC AGACTATGTC
GCCATGGCGC AAACCTACAA TCATGCCATC GATGCGCTAC GCCTGACGCT CACCGAGGTT
CGCAACACGA CCTACGAGAT CGCCGAGGGC AGTACCAATC TTTCGGGAGC CGCCGACGAC
CTGGCGCGGC GCACGGAACA GCAGGCCGCA GCACTCGAGG AGAGTTCACG GGTGCTCGGC
GAACTGACCG ACAGCGTGCG GACGACCGCC GAAAACGCCC GGCAGACGTC GCTTTCGGTC
GCGGAAGCCC ACCGCCAGGC GGAGCATTCC GCAGCCGTCG TGGCGAAAGC CGTCGATGCC
ATGGGCGCCA TCAACCGTTC ATCCGAGAAG GTCACCAGCA TCATCGGCGT GATCGACGAG
ATCGCCTTCC AGACCAATCT TCTTGCCCTC AATGCGGGCG TGGAAGCGGC GCGCGCGGGG
GAGGCCGGCA GAGGCTTTGC CGTGGTTGCT CAGGAGGTGC GTGAGCTTGC CCAGCGCTGC
GCCAAGGCTG CCCGCGAGAT CAAGGACCTC ATCTCCAACA GCGCATCGCA GGTCGGCGCT
GGCGTCACCC TCGTCGAGGA AACCGGCCAT GCGCTTTCTG CCATCATGGA GCACTTCACC
TCGATCAATG GACTGGTGCA GGTCATTTCT GCTTCGACGA CCACGCAATA CAAGGGCATC
GACGAGGTGA ACAACGCCGT TCGCGACGTC GAGCATATCA CCCAGCACAA CGCAGCAATG
GTGGAGGAAA ACACAGCGGA AATTCACAGG CTTCGGCAGC AGGTGGAACT GTTGAACGAA
AGAATTTCCC ACTTTCAGAC CGCCGACGGC CGCAGGACTT CGCCTCCAAG CATCGTGCGG
ATGGCCGCGG TCTCCTAA
 
Protein sequence
MALIDRLLQR MRIVTKVLFF VVPLIVLIAG IGLFGYFTAG TLNGQMTLTR QTIDTLSSFQ 
QLRSSLTAFT DLPAAATRDR LIASISDQQK GAATLDAMLI DPAQKQQIAA VRELGAKMQG
GADALWAVSQ ERVNTEQAID DAVAGLFKES QTARKQLDVL QDQANSKEAF VRALLLDASA
YKNLAGRIAK LRKATAAAAD PQKLGQAIGS LLPPLVKEVG DSGALASDKA QSQIAALKPV
LDKLAPMAKD SSLTLEAYAP VDQDLQGLQE QFAKLASGNA DTAIERFTGM DASISTLRSM
VAIVNAAFKS IDDLRLHLSE LNRRVDAESR DAVLADLKAL RESAAKLVPL SGKNAALQDL
AKKIEPSLAT IEKDTSLLIS IADRWRADKE AATALVADAS HTLEQFVSTA QESGKEISQR
SATMSLAAMI AGTVLAIIGG LMLIETLRGP LKRITQTMMR LAAGDLNVAI GDGKRGDEIG
DMIRSVTVFR DQALEKTRLE EVAETNRARD EREQARRAAE QARIEAEQSE ALTALSEMLG
KLANGNLAAE MSEDLAADYV AMAQTYNHAI DALRLTLTEV RNTTYEIAEG STNLSGAADD
LARRTEQQAA ALEESSRVLG ELTDSVRTTA ENARQTSLSV AEAHRQAEHS AAVVAKAVDA
MGAINRSSEK VTSIIGVIDE IAFQTNLLAL NAGVEAARAG EAGRGFAVVA QEVRELAQRC
AKAAREIKDL ISNSASQVGA GVTLVEETGH ALSAIMEHFT SINGLVQVIS ASTTTQYKGI
DEVNNAVRDV EHITQHNAAM VEENTAEIHR LRQQVELLNE RISHFQTADG RRTSPPSIVR
MAAVS