Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_5028 |
Symbol | |
ID | 6978122 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011368 |
Strand | + |
Start bp | 675154 |
End bp | 676740 |
Gene Length | 1587 bp |
Protein Length | 528 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643394172 |
Product | RNA polymerase, sigma 54 subunit, RpoN |
Protein accession | YP_002278990 |
Protein GI | 209547072 |
COG category | [K] Transcription |
COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGTTGT CCGCCAATCT ATCACTGCAT CAGACGCAAT CCCTTGTCAT GACACCGCGA CTAGTAGAGT CGATCAAGTT GCTGCGAATG AATCATCACG AACTCAGCCA GTTCATTTCT CAGAAAGCGG AGGAGAATCC CCTCCTCGAA ATTTCGTCGG ATGAGGTCGA AGGCGACGAG TGGGGGGCAT GCGGCGACGA CCCGCTCAAT CCCTCGCCGG ATGACGCCGC TGATAGCGGC TCCCACAATC GTGAGGAGGC GCTGTCGAGC GACTGGTACG ATGATGTCGG CTGCGCCGGC ACCACTCGGC TGAACGGTGA GCTCGACGAC AAGTATTCCA ACGTCTACGA GGATTGTGGC TCAAGCGACC TTGATGCGCC TGGATCCGAC GACCAGCGGC AATCGGGTAG CAGTGGAAAG GGCCCCGATT ACTATCTCAG TAGACATGTC GCTGGACCCA CGACGTTGGG CCATCATCTC GCCCAGCAAA TCCCCTTCGT CCTGCCCGAC AAGGTCGATC GGCTGATTGC GCAGTACTTA GTCGATCGGC TCGACGATGC CGGTTACCTG CAGGTCGAAC TCATCGAGGT CGCCGAGCGG CTGGGCACGA GTCTGACTGC GGCCGAGCGT GTGCTTTCCG CCCTGCAGAC GCTCGATCCA CCGGGAGTTT TCGCCCGCAG CCTTTCGGAG TGCCTAGAGC TCCAGCTCAG GCAGAAGGAT CGGTGCGACC CCGCCATGCA GACGCTGATC GAAAACCTCG AACTGCTGGC ACGGCGCGAC TTTGCTACAC TGAAGCGGCT CTGCGGCGTC GACGAGGAAG ACCTTCTCGA CATGCTTGGC GATATCCAGG AGCTCAATCC CAAGCCCGGC CTCGGTTTCG GACGCAGGGC TGGTGACACA TTGCCTGACG TGATTGTCCG ACGCTCTTTA GAAGGTGGCT GGCTGGTCAA TCTCAATCCG AATACCCTGC CGCGCGTGTT GGTCAACCAG TCCTATTTTT CCCAGGTGAC CAAGGGCGGC GAGGTTTACG CATTCCTTGC CGAGTGCCTT CGGGACGCCG AGTGGCTAAC GCGCAGCCTC AACCAGCGGG CAAACACGAT CATGAAGGTG GCAAACGAGA TTGTCCGCCA GCAGGACGCC TTCCTGCTGA ACGGTGTTGA CCACCTGCGC CCGTTGAATC TGAAAACGGT GGCACAGGCA ATCGACAGGA GCGAATCCAC CGTCAGCCGC GTTACCTCGG ACAAATATAT GCTGACGCCG CGCGGCCTCT TCGAGCTGAA ATATTTCTTC ACCGTCTCGA TCAGCGCGGT TGCTGGCGGC GACAGCCATT CAGCCGAGGC GGTGCGTCAC AAGATCCGCG CGGTGATCAT GCAGGAGAGC CCGGACGCGG TGCTCTCCGA CGACGACATC GTAGACATGC TGAAGAAGGG TGGCGTCGAT CTCGCCCGCC GCACGGTGGC CAAATACCGC CAGGCTATGA ACATCGCCTC CTCGGTTCAG CGCGGTCGCG AAAAACGGGC ACGCGCAAAC TCGCCGGTTC GTGAGGACTC TTCAATGGTA TTCCCCTCGA AAACGCAAAG CGAGTGA
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Protein sequence | MPLSANLSLH QTQSLVMTPR LVESIKLLRM NHHELSQFIS QKAEENPLLE ISSDEVEGDE WGACGDDPLN PSPDDAADSG SHNREEALSS DWYDDVGCAG TTRLNGELDD KYSNVYEDCG SSDLDAPGSD DQRQSGSSGK GPDYYLSRHV AGPTTLGHHL AQQIPFVLPD KVDRLIAQYL VDRLDDAGYL QVELIEVAER LGTSLTAAER VLSALQTLDP PGVFARSLSE CLELQLRQKD RCDPAMQTLI ENLELLARRD FATLKRLCGV DEEDLLDMLG DIQELNPKPG LGFGRRAGDT LPDVIVRRSL EGGWLVNLNP NTLPRVLVNQ SYFSQVTKGG EVYAFLAECL RDAEWLTRSL NQRANTIMKV ANEIVRQQDA FLLNGVDHLR PLNLKTVAQA IDRSESTVSR VTSDKYMLTP RGLFELKYFF TVSISAVAGG DSHSAEAVRH KIRAVIMQES PDAVLSDDDI VDMLKKGGVD LARRTVAKYR QAMNIASSVQ RGREKRARAN SPVREDSSMV FPSKTQSE
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