Gene Rleg2_4908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_4908 
Symbol 
ID6978002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011368 
Strand
Start bp549940 
End bp551019 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content63% 
IMG OID643394065 
ProductABC transporter related 
Protein accessionYP_002278883 
Protein GI209546965 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4175] ABC-type proline/glycine betaine transport system, ATPase component 
TIGRFAM ID[TIGR01186] glycine betaine/L-proline transport ATP binding subunit 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.326635 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAGC ATCGTTTCGG CGGCATCAAG ATCCGCCATC TCTACAAGAT CTTCGGCCCC 
AACCCGGCCG CATATGTCGA TGCGGTGCAG AAGGGACTGT CGAAGACCGA GCTCAATGAA
AAGCACGGCC ATGTGCTCGG CCTCAGGGAC ATCAATGTCG AGATCCCCTC CGGCCGCATC
CAGGTCGTCA TGGGCCTTTC GGGCTCGGGC AAATCGACGC TGATCCGCCA TATCAACCGG
CTGATCGATC CGACCGCCGG CGAAGTGCTG GTCGACGGCG TCGATGTCGT CAAGATGAAC
GAGACCGAGT TGCGGGCGTT TCGCCGGCAC CAGACGGCGA TGGTGTTTCA GAAGTTCGCG
CTTCTGCCCC ACCGCAACGT GCTCGACAAC ACCATCTTCG GCCTCGAAGT CCAGGGCATG
GAGCGGTCAA AAGCCGTCGA CGTCGCCATG CGCTGGCTGG AGCGGGTCGG GCTGAAGGGC
TTCGAGCAGC GCTATCCCAA CCAGCTCTCC GGCGGCATGC AGCAGCGTGT CGGCCTGGCG
AGAGCTCTCT CCAACGATGC CCCCGTCCTC CTCATGGACG AGGCCTATTC GGCGCTCGAC
CCGCTGATCC GCACCGACAT GCAGACCGTG CTTCTCGATA TCCAGAAGGA GATCAAGAAG
ACCATCGTCT TCATCACTCA CGATCTCGAC GAGGCGCTGC GTCTCGGCGA CCAGATCGCC
ATCCTGCGCG ACGGCGAAGT CATCCAGCAG GGCACCAGCC AGGACATCGT CCTGCGCCCC
GCCGACGACT ACATCGCCAA CTTCGTCAAG GAGGTCAATC GTGGCAGGGT CATCCATGTC
GAAGCCGTTA TGACGCCGCT GCACTCCGGT GCGGCGCCGG TTGGACTGGC AATTGTGGCG
GGAACGACCG TCGAAGAGGC CGTCCGGATG CTGTCATCGG CGCCAGAGGG CGACGCCCGG
GTGGTTTCGC CTTCCGGAGA AACCTTAGGG CTCGTCACCT TCCGCCAGCT CGCAAGTGCG
ATGGTGAACT CACATGATAT GGCTCCCAAG CGCGACAGCG CCCTGTCGGT CGCCCTCTGA
 
Protein sequence
MAEHRFGGIK IRHLYKIFGP NPAAYVDAVQ KGLSKTELNE KHGHVLGLRD INVEIPSGRI 
QVVMGLSGSG KSTLIRHINR LIDPTAGEVL VDGVDVVKMN ETELRAFRRH QTAMVFQKFA
LLPHRNVLDN TIFGLEVQGM ERSKAVDVAM RWLERVGLKG FEQRYPNQLS GGMQQRVGLA
RALSNDAPVL LMDEAYSALD PLIRTDMQTV LLDIQKEIKK TIVFITHDLD EALRLGDQIA
ILRDGEVIQQ GTSQDIVLRP ADDYIANFVK EVNRGRVIHV EAVMTPLHSG AAPVGLAIVA
GTTVEEAVRM LSSAPEGDAR VVSPSGETLG LVTFRQLASA MVNSHDMAPK RDSALSVAL