Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_4904 |
Symbol | |
ID | 6977998 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011368 |
Strand | + |
Start bp | 543158 |
End bp | 545086 |
Gene Length | 1929 bp |
Protein Length | 642 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643394061 |
Product | diguanylate cyclase with PAS/PAC sensor |
Protein accession | YP_002278879 |
Protein GI | 209546961 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0484368 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.638753 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAGTT CGTTACAGGT ATTGGAAGGT GGATACATCG CGGTGAATGG CAATTGGACG CAATTCGGTG GCAACCTTTC CTTCGTGTGC CTGGCAATTT CGCTCTGGGC GCTTTTTTCG ATTGAGTTTC AGCGCCGGTC CTTCAGGCAG GAAAAAATCG CCTTCGGGAT CATAGCCGGC GGCGCCTCCA TCGGATCCAT ATTGCTGGCC GTTGAATTCC ACCCCGGCAT CTATATCGAC CTGCGTTTTT CGCCGCTTGC ATTGGCCGGC ATGTTCGGGG GGCCGATCGC GGCGGCCTTT GCCGCGGCGC TGGCGATGGC CTTTCGTTTT GCCGTCGGCG GCACAGCGAT GGTCGACGGG ATCATCACCA TGGCCGTCGC CACCGGCATT GGTTTGGCCG GTCATTTCTG GACCTTCAAG AGATCGCCGG GGCTTAAGGA CGTTGCGCTG CTGAGCCTTG CCCTTGGCGT TGCATTGGTC CTGTCGATGG CCTTGCTTCC CACCTTGGTG AATGCCCATG TGCTCGCCGG CGTCGGTTTC CCCCTGACGG CATTGAATTG TCTCGCGACT GTTCTGGGTG GTTTCGTTCT GCTGAAGACA CAGCAATGGG AGCTGGAGCG AAGCATATTG GTGACCGCAT TTTCGCAGTC GCCCGATTAT CTCTATGTCA AGGACCGAAA CAGCCGGTTC ATCACCGTCA ATGAAAACAT GACCCGCCTC TTCCGCTTCC GGACCACGGC GGAGATGATC GGATTGTCGG ATTTCAATCT GATGTCGCGG CCGCTTGCCG AGGAATTATA TTACCTCGAG CAGCAGGTCA TAGACACCGG CGTGCCGCTG ATCGATTCGA CCGAGCATAT CGAAGGCAGA TTCCTGCTCG CCTCCAAAGT GCCGCTGCGG GACAAGCAGG GGCGGGTGAT CGGCCTTGCC GGCGTCACGC GCGATGTTAC CGAGCGCACC GCTCTGGAGC GGGAATTGCG CGAAAGCAAG AACCTGCTCT CGCATGCGAT GGCCAGCATG TCCGATGGCA TCGCCATGTA CGATAGCAAG GGGTTTATTC TCTTTTGCAA TGAGCAGTAT CGCAATGCCT TCCCGCTCTC CGGCGAGGCC CGCGTGGTTG GCGCCCATAT CAGCGACATC CTGCGCCGCG TCGTCGAAAC CGGCGAGCGG CCTGGTATTC CCGATGATGT GGACGGGTGG ATCAACGCCG CCGCCGCCTC GCTGCACAGC AACAAGGACG AAGAGGTTCA GCTTCACAAC GGCGACTGGC GCAGCATCCG GACAAGGCTT GCTGAAGACG GCACGGCGAT GGCCGTCGTC TCCGATATTA CGGCGACGAA ACAGGCGGAA ATCGCACTCA GGCTGTCGGC GGAGGAGTTG AAGAGCCTTG CCGAGACCGA TGGCCTCACC GGCATGGTCA ACCGCCGGAC CTTCGACGAG GCTTTCGCCC GCGAAACCTC GGGCAGTGGC AGGAGGAACA TGCTGTTCAG CCTGCTGATG GTCGATATTG ACCGCTTCAA GGCCTATAAC GACACCTATG GTCATCCTGC CGGAGACCAA TGCCTGCGGG TCGTCAGCAA GTGCCTGCGC CAATCCGTCA GCCGGCCGGC CGATATCGTC GCCCGTTACG GCGGTGAGGA ATTCGTGGTG TTCCTGCCCG ACACCAGCGC CAAAGGCGCA ATGATCGTCG CCGAACAATT CGCCAGGCGC CTCGCCCAGG AGGATATCGT CCATTCAGGC AGCGAGTTCG CCCGGGTGAC GGCGAGCATC GGGGTATCCT GTGCAACGGG CGCCGAGCTG CGGACCAACC CGAACCGCCT GCTGACCGAG GCCGACGCGG CGCTCTACGA AGCCAAAACC CAGGGCCGCA ATCGCATTCT CGCCCATTCG CCCAACGGCG AACGGCATGC CATGAAGGAA GCCGGTTAG
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Protein sequence | MMSSLQVLEG GYIAVNGNWT QFGGNLSFVC LAISLWALFS IEFQRRSFRQ EKIAFGIIAG GASIGSILLA VEFHPGIYID LRFSPLALAG MFGGPIAAAF AAALAMAFRF AVGGTAMVDG IITMAVATGI GLAGHFWTFK RSPGLKDVAL LSLALGVALV LSMALLPTLV NAHVLAGVGF PLTALNCLAT VLGGFVLLKT QQWELERSIL VTAFSQSPDY LYVKDRNSRF ITVNENMTRL FRFRTTAEMI GLSDFNLMSR PLAEELYYLE QQVIDTGVPL IDSTEHIEGR FLLASKVPLR DKQGRVIGLA GVTRDVTERT ALERELRESK NLLSHAMASM SDGIAMYDSK GFILFCNEQY RNAFPLSGEA RVVGAHISDI LRRVVETGER PGIPDDVDGW INAAAASLHS NKDEEVQLHN GDWRSIRTRL AEDGTAMAVV SDITATKQAE IALRLSAEEL KSLAETDGLT GMVNRRTFDE AFARETSGSG RRNMLFSLLM VDIDRFKAYN DTYGHPAGDQ CLRVVSKCLR QSVSRPADIV ARYGGEEFVV FLPDTSAKGA MIVAEQFARR LAQEDIVHSG SEFARVTASI GVSCATGAEL RTNPNRLLTE ADAALYEAKT QGRNRILAHS PNGERHAMKE AG
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