Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_3949 |
Symbol | |
ID | 6982713 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | + |
Start bp | 4097782 |
End bp | 4098624 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643398672 |
Product | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase |
Protein accession | YP_002283437 |
Protein GI | 209551520 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.242599 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTGA TGCGTGTTGG CCAAGCAGGC AATGAAAAAC CCGCGCTTCT CGACGTCGAT GGCAAGATCC GCGATCTCTC CGGTCATGTG GCCGATATCG GCGGCGAGGT GATCACGCCG GCCGGTCTTG CAAAGATAGC GGCGATCGAT CCGAAGAGCC TTCCGGAACT TATGCCCGGC CGTATCGGCG CCTGCGTCGC CGGCACTGGC AAATTCATCT GCATCGGCTT GAATTATTCG GATCATGCTG CCGAAACCGG CGCCACCGTT CCGCCCGAGC CGATCATCTT CATGAAAGCA ACATCGGCAA TTGTCGGCCC GAACGACGAT GTCATCATCC CCCGCGGTTC GGAAAAGACC GATTGGGAAG TCGAACTCGG CGTCGTCATC GGCAAGACTG CCAAATATGT AACGGAAGCC GAAGCGCTGG ACTATGTCGC CGGTTATTGC GTCTCCAACG ATGTCTCCGA GCGCGCTTTC CAGACCGAGC GGTCCGGGCA ATGGACGAAG GGCAAGTCCT GCGACACTTT TGGCCCGATC GGCCCATGGC TCGTGACCAA GGACGAAATT CCCGAACCGC AGAACCTTGG CATGTGGCTG ACGGTCAACG GCCAGAAGAT GCAGAACGGC TCGTCGAAGA CGATGGTTTA CGGCGTGGCT TTCCTGGTCT CCTACCTCAG CCAGTTCATG TCGCTGCATC CCGGCGACGT GATCTCGACC GGCACGCCTC CGGGCGTCGG CATGGGCCTC AAGCCGCCGC GTTATCTCAA GGCTGGCGAC GTGGTCGAAC TCGGCATCGA AGGTCTCGGC ACCCAGAAGC AGACCTTCGT AGCGGACCGT TAA
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Protein sequence | MKLMRVGQAG NEKPALLDVD GKIRDLSGHV ADIGGEVITP AGLAKIAAID PKSLPELMPG RIGACVAGTG KFICIGLNYS DHAAETGATV PPEPIIFMKA TSAIVGPNDD VIIPRGSEKT DWEVELGVVI GKTAKYVTEA EALDYVAGYC VSNDVSERAF QTERSGQWTK GKSCDTFGPI GPWLVTKDEI PEPQNLGMWL TVNGQKMQNG SSKTMVYGVA FLVSYLSQFM SLHPGDVIST GTPPGVGMGL KPPRYLKAGD VVELGIEGLG TQKQTFVADR
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