Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_3931 |
Symbol | trmE |
ID | 6982695 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | - |
Start bp | 4081410 |
End bp | 4082723 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643398654 |
Product | tRNA modification GTPase TrmE |
Protein accession | YP_002283419 |
Protein GI | 209551502 |
COG category | [R] General function prediction only |
COG ID | [COG0486] Predicted GTPase |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.45905 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCATG ATACGATCTA TGCGCTATCG AGCGGTGCCA CACCCTCAGG TGTGTCGGTC GTTCGGATCA GCGGCCCGTT GACCAAAGAC ATATTGGTCG GGCTCGTCGG ATCAGTACCG ACAGCCCGAT ATGCCGTACG GCGAACGATT CGGAATCGTA ACAACCAGCC GATCGACAGC GGCCTCGTAT TGTTTTTTCC TGGGCCACAC TCGTTTACCG GCGAAGACGT CGCCGAACTG CAGCTACATG GCAGCAAAGC CGTGCTGGCG GCGCTGTTTG AGGCCCTTTG TGAATTGCCA GGCGTTCGGA TGGCGGTTGA GGGCGAGTTC TCCCGCCGCG CTTTTGAAAA TGGCAAGCTT GATCTCGTCG AAGTCGAAGG CCTAGCCGAT CTTATCGGCG CGGAAACCGA GATGCAGCGG CGTCTTGCGG TCGAACAGAG CGCAGGGGGG CTTTCCCTGA TTTACGATTC GTGGGCGGAA CGATTAACGC GTGCCCGCGC GTTGATCGAG GCGGAACTTG ATTTTCCCGA CGAGGATGAT GTTCCAGGCT CGGTATCCGA CATGGTCTGG GCTGAGATGG AAAGGCTGCG CCAAGATATC GGGCAGCACC TCTCGGCAGC CTCGGCGGGA GAGATTATCC GGGACGGCTT CAAGGTGGTC ATCGCCGGGG CGCCCAACGC AGGGAAATCC AGCCTGCTGA ACGCTCTCGC ACGACGCGAC GTGGCGATTG TCACTGATAT CGCCGGAACT ACCCGCGATG TTCTGCAGGT CGATCTCGAC ATTGATGGCT ACCTGGTCAA GCTCTATGAC ACGGCGGGTC TTCGTGAGGC GGATGACCGG GTTGAAATGG AGGGCGTGCG GCGTGCACGT GTCGCGCTCC GTGATGCCGA TCTCGTCTTG CTGCTGGTCG ACATGACGAA CCCCCTGCTC CCTGACGACT TGGACCAGGC TGCACCACAT GTTACTGTCG GGACGAAGAA GGATCTTGTG GATGTCGTCT CGGGTCATTA CGACCTGCAG ATCTCGACGG CAACGGGTGA AGGCTTGTCG GAATTGCGGC AGGTGATCGG CAACAGCGTC GCCACGCGGT TTACCGGCCT CTCCATGGCT ATTCCGAGCC GCCAACGGCA TAAAGATTCG CTGGCGAAAT GTTTGACGGC GCTTGAGATC GCCATCTCGG CGACGGATGT CAATCTCGAG TTGCGCACTG AACAGCTTCG CATTGCTGCG GACTATTTGG GCAGAATTAC CGGCAGAGTG GATGTTGAGC AGCTGCTCGG CGTGATCTTC TCAGAGTTTT GTATCGGCAA GTGA
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Protein sequence | MLHDTIYALS SGATPSGVSV VRISGPLTKD ILVGLVGSVP TARYAVRRTI RNRNNQPIDS GLVLFFPGPH SFTGEDVAEL QLHGSKAVLA ALFEALCELP GVRMAVEGEF SRRAFENGKL DLVEVEGLAD LIGAETEMQR RLAVEQSAGG LSLIYDSWAE RLTRARALIE AELDFPDEDD VPGSVSDMVW AEMERLRQDI GQHLSAASAG EIIRDGFKVV IAGAPNAGKS SLLNALARRD VAIVTDIAGT TRDVLQVDLD IDGYLVKLYD TAGLREADDR VEMEGVRRAR VALRDADLVL LLVDMTNPLL PDDLDQAAPH VTVGTKKDLV DVVSGHYDLQ ISTATGEGLS ELRQVIGNSV ATRFTGLSMA IPSRQRHKDS LAKCLTALEI AISATDVNLE LRTEQLRIAA DYLGRITGRV DVEQLLGVIF SEFCIGK
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