Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_3798 |
Symbol | |
ID | 6982561 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | - |
Start bp | 3929467 |
End bp | 3930528 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643398520 |
Product | Lysine--tRNA ligase |
Protein accession | YP_002283286 |
Protein GI | 209551369 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2269] Truncated, possibly inactive, lysyl-tRNA synthetase (class II) |
TIGRFAM ID | [TIGR00462] lysyl-tRNA synthetase-like protein GenX |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00227981 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.497071 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTCTT CGGCGAAAGC GTCCCCCTGG TGGACCCCGT CCGTGCATGC AGATCGCCGC CCGTTCCTGA TCGGGCGCAA TGCGATCCAG GCGGCGTTGC GCGGCTTTTT CGCGCGCGAA GATTTCCTCG AGGTGGATAC GGCGACGCTG CAAATCTCGC CGGGCAACGA GGCGCATCTG CATGCCTTCG CCACGGAAGC GCTGACGACG GACGGGCAAA GGGCGCCGTT CTATCTGCAC ACCTCGCCGG AATTCGCCTG CAAGAAGCTG CTTGCGGCGG GCGAGGAACG TATCTCTTGT TTTGCCCATG TCTATCGCAA CCGCGAGCGC GGGCCGCTGC ACCATCCCGA ATTCACCATG CTCGAATGGT ACCGGGCCGG CGAAAGCTAT GAGAGCCTGA TGATGGACTG CGTGCGGATC GTGGCGCTGG CCGCCGAAAC GGCAAAGACC GAAAAGCTTG CCTATCGCGG CGGCGAGAGT GATCCTTTTG CCGGTCCGGA GCGGATCAGC GTTGCCGAAG CCTTTGAGCG CCATGCCGGT ATCGATCTTC TCTCTTCGGT CGCCGCCGGC GGTTCGACCG ATCGCGATCA TCTGGCGGCC GAGATGAAGC GTGTCGGCAT GCGTGTTGCC GATGACGACG GCTGGGCCGA TTTGTTCAGC CGGGTGCTGG TCGAAAAGAT CGAGCCGCAT CTCGGCTTCG GCCGCATCAC CATCCTAGAC GAATATCCGG TCTCGGAAGC AGCGCTCGCG CGCCCTTCGG CCCGCGATCC AAGGGTTGCC GAGCGTTTCG AGCTCTATGC CTGCGGCGTC GAAATTGCCA ACGGCTTCGG CGAACTGACC AACGCTGCCG AGCAGCGCCG GCGGTTCGAG ATCGAGATGG CGGAGAAGGC GCGTATCTAT GGCGAGACCT ATCCGCTCGA CGAGGATTTC CTCGCCGCAC TTTCGCTGAT GCCCGAGGCA AGCGGCATCG CGCTCGGCTT CGACCGGCTG GTAATGCTGG CGACGGGAGC GTCGCGCATC GATCAGGTGC TCTGGGCGCC GGTAGCGGAG TATGGACGAT GA
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Protein sequence | MNSSAKASPW WTPSVHADRR PFLIGRNAIQ AALRGFFARE DFLEVDTATL QISPGNEAHL HAFATEALTT DGQRAPFYLH TSPEFACKKL LAAGEERISC FAHVYRNRER GPLHHPEFTM LEWYRAGESY ESLMMDCVRI VALAAETAKT EKLAYRGGES DPFAGPERIS VAEAFERHAG IDLLSSVAAG GSTDRDHLAA EMKRVGMRVA DDDGWADLFS RVLVEKIEPH LGFGRITILD EYPVSEAALA RPSARDPRVA ERFELYACGV EIANGFGELT NAAEQRRRFE IEMAEKARIY GETYPLDEDF LAALSLMPEA SGIALGFDRL VMLATGASRI DQVLWAPVAE YGR
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