Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_3690 |
Symbol | sdhA |
ID | 6982452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | - |
Start bp | 3819933 |
End bp | 3821774 |
Gene Length | 1842 bp |
Protein Length | 613 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643398412 |
Product | succinate dehydrogenase flavoprotein subunit |
Protein accession | YP_002283179 |
Protein GI | 209551262 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup [TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACCGA CTTCACCCGC CCAGAACGGC AAGGCCTACA AATATGTCGA TCACTCCTAC GACGTGATCG TCGTCGGCGC CGGCGGCGCC GGCTTGCGCG CCACGCTGGG CATGGCCGAG CAGGGTTTTC GCACGGCCTG CATCACCAAG GTATTCCCGA CCCGCTCGCA TACGGTTGCG GCGCAGGGCG GCATTGCCGC CTCGCTGCGC AACATGACGC CCGATAGCTG GCAGTGGCAC CTCTACGACA CCGTCAAGGG CTCCGACTGG CTCGGCGACG TCGACGCCAT GCAGTACCTG ACCATGGAAG CGCCGAAGGC GGTCTATGAG CTCGAGCATT ACGGCGTGCC TTTCTCGCGC AACGAGGAAG GCAAGATCTA TCAGCGCCCG TTCGGCGGCC ATATGCAGAA TTACGGTGAA GGCCCGCCGG TGCAGCGCAC CTGCGCCGTT GCCGACCGCA CCGGCCACGC CATCCTGCAC ACGCTTTACG GCCAGTCGCT GCGCCACAAC GCCGAATTTT TCATCGAGTA TTTCGCGCTC GACTTGATCA TGTCGGAAGA TGGCAGCCGC TGCACCGGCG TCGTCGCCTG GTGCCTCGAC GACGGCACGA TCCATCGCTT CGCCGCCAAG ATGGTGGTGC TGGCGACCGG CGGCTACGGC CGCGCCTATT TCTCGGCGAC CTCTGCTCAC ACCTGCACCG GCGACGGCGG CGGCATGGTG GCGCGCGCCG GCCTGCCGTT GCAGGACATG GAATTCGTCC AGTTCCACCC GACCGGCATC TACGGTTCGG GCTGTCTGAT CACCGAAGGC GCGCGCGGCG AAGGCGGTTA CCTCGTCAAC TCCGAGGGCG AGCGCTTCAT GGAGCGTTAC GCGCCGTCGG CCAAGGACCT TGCCTCGCGC GACGTCGTTT CGCGCTGCAT GACGCTGGAA ATCCGCGAAG GCCGCGGCGT CGGCAAGAAC AAGGACCACA TCTTCCTGCA TCTCGACCAT CTCGATCCGG CGGTGCTGCA CGAGCGGCTG CCGGGGATTT CCGAGAGCGC CAAGATCTTC GCCGGCGTCG ATGTCACGCG CGAGCCGATC CCGGTTCTGC CGACCGTTCA TTACAATATG GGCGGCATTC CGACGAATTA TTGGGGCGAA GTGCTGAACG CCGACGGCGC CAATCCGGAA CGGATCATCC CCGGGCTGAT GGCTGTCGGT GAAGCCGGCT GCGCCTCGGT GCACGGCGCC AACCGCCTTG GCTCCAACTC GCTGATCGAC CTCGTGGTCT TCGGCCGGGC CGCTGCGATC CGCGCCGGCG AGGTGATCGA CCGCGCAGCG CCGATCCCGC ATCTCAATGT CTCAGCCTGC GACAAGATCA TGGACCGCTT CGACGGCCTG CGTCACGCCA GCGGCAGCAC GCCGACGGCG GAACTGCGCG AGAAGATGCA GCGGGCCATG CAGGAAGACG CCGCCGTCTT CCGCACGCAG GAATCGCTGG AATCCGGCTG CCGGCGCATC TCGGCGATCT GGCAGGAAAT GCGTGATATC AAGGTGACCG ACCGCTCGAT GATCTGGAAC TCGGATCTTG TGGAGACGCT GGAGCTGCAG AACCTGATGG CCAACGCCAT CACGACGATC TACGGCGCCG AGGCCCGCAA GGAGAGCCGC GGTTCGCATG CCCGCGAGGA TTATACCGAG GGCGCATTCG CCGGCCGCGA CGACGTCAAC TGGCGCAAGC ATACGCTTGC CTGGGTCAGC GAGGCAGGCG ACGTGAAACT CGATTACCGG CCCGTTCACA CCGACCTCAT CGCGGAAGGC ATCGACCCGC ACAAGATCGA GCCGAAAGCG CGTGTCTATT AA
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Protein sequence | MAPTSPAQNG KAYKYVDHSY DVIVVGAGGA GLRATLGMAE QGFRTACITK VFPTRSHTVA AQGGIAASLR NMTPDSWQWH LYDTVKGSDW LGDVDAMQYL TMEAPKAVYE LEHYGVPFSR NEEGKIYQRP FGGHMQNYGE GPPVQRTCAV ADRTGHAILH TLYGQSLRHN AEFFIEYFAL DLIMSEDGSR CTGVVAWCLD DGTIHRFAAK MVVLATGGYG RAYFSATSAH TCTGDGGGMV ARAGLPLQDM EFVQFHPTGI YGSGCLITEG ARGEGGYLVN SEGERFMERY APSAKDLASR DVVSRCMTLE IREGRGVGKN KDHIFLHLDH LDPAVLHERL PGISESAKIF AGVDVTREPI PVLPTVHYNM GGIPTNYWGE VLNADGANPE RIIPGLMAVG EAGCASVHGA NRLGSNSLID LVVFGRAAAI RAGEVIDRAA PIPHLNVSAC DKIMDRFDGL RHASGSTPTA ELREKMQRAM QEDAAVFRTQ ESLESGCRRI SAIWQEMRDI KVTDRSMIWN SDLVETLELQ NLMANAITTI YGAEARKESR GSHAREDYTE GAFAGRDDVN WRKHTLAWVS EAGDVKLDYR PVHTDLIAEG IDPHKIEPKA RVY
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