Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_3688 |
Symbol | sdhB |
ID | 6982450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | - |
Start bp | 3818801 |
End bp | 3819580 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643398410 |
Product | succinate dehydrogenase iron-sulfur subunit |
Protein accession | YP_002283177 |
Protein GI | 209551260 |
COG category | [C] Energy production and conversion |
COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.812558 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTTGAAC TCGCTCTTCC CAAAAACTCG CAGATGCGCG AAGGCAAGGT CTGGCCGAAG CCGGCGGGTG CGACGAACAC CCGCGAATTC CGCGTCTACC GCTGGAGCCC GGATGACGGG CAGAACCCGT CGATCGATAT CTTCTACATC GATGTCGACG ATTGCGGCCC GATGGTGCTC GACGGCCTGC TCTATATCAA GAACAAGATC GACCCGACGC TGACGCTGCG CCGGTCCTGT CGCGAGGGCA TCTGCGGTTC CTGCGCGATG AATATCGACG GCACGAACAC GCTCGCCTGC ACCAAGGGTC TCGACGATAT CACCGGCGCA GTGAAGATCT ATCCGCTGCC GCATTTGCCC GTCGTCAAGG ATCTGGTGCC GGATCTCACC AACTTCTACG CCCAGCATCG TTCGATTGAG CCCTGGCTGA AGACGGTGTC GCCGGCGCCC GCCAAGGAAT GGAAGCAGAG CCATGAGGAC CGGCAGAAGC TCGACGGCCT TTACGAATGC ATCCTCTGCG CCTGCTGCTC GACCTCCTGT CCGAGCTATT GGTGGAACGG CGACCGCTAT CTTGGTCCGG CCGTCCTGCT GCAGGCCTAT CGCTGGCTGA TCGATTCCAG AGACGAGGCA ACCGGCGAAC GTCTCGACAA TCTTGAGGAC CCGTTCCGCC TGTATCGCTG CCACACGATC ATGAATTGCG CGCAGACCTG CCCGAAGGGC CTCAACCCGG CCAAGGCAAT CGCCGAGATC AAGAAGATGA TGGTCGAGCG CCGGGTCTGA
|
Protein sequence | MVELALPKNS QMREGKVWPK PAGATNTREF RVYRWSPDDG QNPSIDIFYI DVDDCGPMVL DGLLYIKNKI DPTLTLRRSC REGICGSCAM NIDGTNTLAC TKGLDDITGA VKIYPLPHLP VVKDLVPDLT NFYAQHRSIE PWLKTVSPAP AKEWKQSHED RQKLDGLYEC ILCACCSTSC PSYWWNGDRY LGPAVLLQAY RWLIDSRDEA TGERLDNLED PFRLYRCHTI MNCAQTCPKG LNPAKAIAEI KKMMVERRV
|
| |