| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_3514 |
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| Symbol | |
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| ID | 6982268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011369 |
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| Strand | + |
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| Start bp | 3632878 |
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| End bp | 3636060 |
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| Gene Length | 3183 bp |
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| Protein Length | 1060 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643398232 |
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| Product | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family |
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| Protein accession | YP_002283007 |
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| Protein GI | 209551090 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTCGC GTTTCTTCAT TGAGCGACCG GTACTCGCCA ACGTCTTGGC ATTGGTTTTC
GTGCTCGTCG GCGCGGTCGC GCTGTACCAA CTGCCGGTGG CGCAATATCC GAATGTCGTC
CCGCCGACGG TGCAGGTGAC GACACGCTTT CCCGGCGCCA GCGCCCAGAC CCTCGTCGAT
ACCGTCGCGC TGCCGATCGA GCAGCAGGTC AACGGCGTGC AGAATATGCT CTATATGCAG
TCGACCAGCG CCAGCGACGG CACCTATTCG CTGATCGTGA CCTTTGCCAT CGGAACGGAT
CCGGATCAGG CCCAGGTTCT GGTGCAGAAC CGTGTCGCGA TCGCAATGTC GTCACTTACC
GAAGCGGTGC AGCTTCAAGG CGTGACGACC CAGAAGAAAT CGACGGCGAT CCTCGGCTTC
GTCAGCCTGA CCTCGTCCGA CAGCCGCTAT GACAGCCTGT TCCTGTCGAA CTACGCCGTC
ATCAATCTGC AGAACGAACT CGCCCGCCTG CCTGGCGTCG GCAATGTGAC GGTGTTCGGC
GCCGGCCAAT ATGCCATGCG GATCTGGATG GATCCGAACC TGCTGCAGGC GCGCGGCCTG
ACGCCGCAGG ATGTCGTCAG TGTCGTGCAG CAGCAGAGCC AAGAGGTCGC CGCCGGCCAG
ATCGGCATTC CGCCGGTGCC GAAAGGGCAG ATCTTCCAAT ACACGCTGAA TGTGAATGGC
CGGCTGAACG AGGCCGCCGA CTACGAGAAC ATCGTCGTCA AGGTCGAAAG CGGACAGGGC
GGCCGCATCA CACGCGTCCG CGATATCGGC CGCGTCGAAC TCGGCGCTCA GACTTACAGC
CAATCCTTCA TGCAGAACGG CCGGCCGGCG GCCGGCATCG GCATTTTCCA ATTGCCGGAG
GCGAATGCCA TTGCCGTGGC GCAGGCGGTT CGCGCGAAGA TGGATGAACT CTCGAAGAGC
TTCCCACCTG GCCTCGAATA TCATCTGCCG TTCGACACGA CGAAATTCGT CGAGGCCTCC
ATCGATGAGG TTTACGTCAC CTTGATCGAG GCCGGGGTTC TCGTTCTCAT CGTCATTCTG
GTCTTCCTGC AGGATTGGCG GGCGATGCTC GTGCCGGCGA CCACCGTTCC CGTCACCATC
ATCGGCGCCT TCGCGGCCAT GGCGGCCTTG GGCTTCACCG TCAACCTGTC GACGCTCTTT
GCCATCGTTC TCGCCATCGG CATTGTCGTC GATGATGCCA TCGTCATCGT CGAAGGTGTG
GCCCGGCACA TCGAGGCCGG CATGTCAGGC CGAAAGGCTG CCGAGAAGGC GATGGAGGAA
CTGCTCGGTC CGGTCATCGG CATCACGCTG GTGCTGATGG CCGTTTTCAT TCCGGCCGCC
TTCCTGCCTG GCCTGACCGG CCAGCTCTAT CGGCAGTTCG CCCTCGTCAT TGCCGCGACC
GCTCTGATCA GCGCCGTCAA CGCCGTCACG CTGAAACCGA CGCAATGCGC CCTTTGGCTG
CGCCCGCCGG TTCCGCCGGA GAAACGCAAC GCCCTCTATC GCGGCTTCAA CAGGGTCTAC
GACCGAGGCG AACGCAGTTA TGCCGGGCTG ATCGGATCGA TGACCCGCCA CAGCGGCATC
ATGGCCATAG CGGCATTTGC GCTGATCGGG GTCGCCGTCT GGGGGCTTTC TCGTCTGCCG
ACCGCCTTCC TGCCCGTCGA GGATCAAGGC TATGTGCTGA TCAGTACACA ACTGCCCGAT
GGCGCCTCGA AGGAACGCAC CGATGCCGTC ATGGAAGAGG TCGGCAAGAT CGCCGAAGCC
ACGCCTGGCG TCGATCAGGT GCTGACCATC AGCGGCATTT CCGTTCTCGA CAACAGTGCC
AGCCTGCAGA ATGCCGGCGT CGCCTATGTC GTTTTGAAAG ATTGGGATGA GCGCGGCAAG
GAGAAGGGAC AGGACCTGCT GTCGATCTAC CAGCATTTAA ACGAGGCGCT GCAGCATGTG
CTGAGCGCCA AAACGCTGGT CGTCGTGCCG CCTCCGATCC AGGGCGTCGG CAATGCCAAC
GGCTTTACCA TGCAGGTCGA GCTCCGGAAC GGCGTGGCCG ACTATCCGCT GCTGCAATCG
CTTGCCGATA CGATTGTCAG GAACGGCAAT GCCCAATCAT CGTTGCAGAG GTTGAGCACG
CCTTTCCGTT CGAACGTGCC GCAGCTTGCG GTCTCCGTCG ATCGCATCAA GGCGGAGACG
CTGGGAATTA CCGTGGGCCA GGTCTTCTCC GCCCTCTCCG GCTATGTCGG ATCCAGCTAT
GTCACCCAGT TCAATAAATT CGGCCGCACC TTCCAGGTCT ATGCGCAAGC CGCTTCCGAT
TTCCGTGTCA GCCCCGACGA TATCCGCAAT CTGAAGGTCA AGGCGGGCGA CGGCACGATG
GTGCCGCTCG GCACGGTCGT CGATGTCAGC ACGACGCAAG GTCCCTCGCT GATCAGCCTC
TACAATCTCT ATCCCACCGC CACCATCGTC GGTGGACCGG CCGCCGGTTT CAGCTCCGGC
CAGTCGCTCG ACGTCATGGA GCAGATCGCC GATCATACAT TGCCGCCGGG AACCGGTTTT
GAATGGACGG CGCTCTCCTA TCAGGAGAAG GCGGTCGGCG GGCAGATCTA CTTCATCTTC
GCGCTCGCCA TGCTGCTCGT CTATTTCGTG CTCGCCGGCC AATATGAAAG CTGGATCCTG
CCGCTGGCGG TCATATCAGC CGTGCCGCTC GCTCTGCTCG GCACGGTGGC CGCGCTCATG
GCAGCGGGCG TCGCCAACAA TCTCTATACC CAGATCGGCC TCATCCTGCT GATTGCGCTC
GCGGCCAAGA ACGCCATCCT GATTGTCGAA TATGCCCGTG AAAAACGGGC GGAGGGCATG
GAAATTCTGG ACGCGGCCGT CGAGGCCGCC CGCCTGCGTT TCCGGCCGAT CCTGATGACG
TCCTTCGCCT TCATCCTCGG TGTCCTGCCG CTTGTGCTGG CGACGGGCGC CGGCGCATCG
GCGCGCAAAT CGATCGGCAT ATCGGTCTTC AGCGGCATGA TCGCCTCGAC CTGCCTCGCC
ATCCTCTTCG TCCCCTCCTT CTACGTGCTG CTGCAGCGCC TCGAGGAATA CTGGAAGCGC
CGCCGAGCGC CCGCAAACAC GGCCGCGAGC GTGGCGGAAG CGGAGATATC GAACGTCGGG
TAA
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| Protein sequence | MISRFFIERP VLANVLALVF VLVGAVALYQ LPVAQYPNVV PPTVQVTTRF PGASAQTLVD
TVALPIEQQV NGVQNMLYMQ STSASDGTYS LIVTFAIGTD PDQAQVLVQN RVAIAMSSLT
EAVQLQGVTT QKKSTAILGF VSLTSSDSRY DSLFLSNYAV INLQNELARL PGVGNVTVFG
AGQYAMRIWM DPNLLQARGL TPQDVVSVVQ QQSQEVAAGQ IGIPPVPKGQ IFQYTLNVNG
RLNEAADYEN IVVKVESGQG GRITRVRDIG RVELGAQTYS QSFMQNGRPA AGIGIFQLPE
ANAIAVAQAV RAKMDELSKS FPPGLEYHLP FDTTKFVEAS IDEVYVTLIE AGVLVLIVIL
VFLQDWRAML VPATTVPVTI IGAFAAMAAL GFTVNLSTLF AIVLAIGIVV DDAIVIVEGV
ARHIEAGMSG RKAAEKAMEE LLGPVIGITL VLMAVFIPAA FLPGLTGQLY RQFALVIAAT
ALISAVNAVT LKPTQCALWL RPPVPPEKRN ALYRGFNRVY DRGERSYAGL IGSMTRHSGI
MAIAAFALIG VAVWGLSRLP TAFLPVEDQG YVLISTQLPD GASKERTDAV MEEVGKIAEA
TPGVDQVLTI SGISVLDNSA SLQNAGVAYV VLKDWDERGK EKGQDLLSIY QHLNEALQHV
LSAKTLVVVP PPIQGVGNAN GFTMQVELRN GVADYPLLQS LADTIVRNGN AQSSLQRLST
PFRSNVPQLA VSVDRIKAET LGITVGQVFS ALSGYVGSSY VTQFNKFGRT FQVYAQAASD
FRVSPDDIRN LKVKAGDGTM VPLGTVVDVS TTQGPSLISL YNLYPTATIV GGPAAGFSSG
QSLDVMEQIA DHTLPPGTGF EWTALSYQEK AVGGQIYFIF ALAMLLVYFV LAGQYESWIL
PLAVISAVPL ALLGTVAALM AAGVANNLYT QIGLILLIAL AAKNAILIVE YAREKRAEGM
EILDAAVEAA RLRFRPILMT SFAFILGVLP LVLATGAGAS ARKSIGISVF SGMIASTCLA
ILFVPSFYVL LQRLEEYWKR RRAPANTAAS VAEAEISNVG
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