| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_3393 |
|---|
| Symbol | |
|---|
| ID | 6982147 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011369 |
|---|
| Strand | + |
|---|
| Start bp | 3506173 |
|---|
| End bp | 3507249 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643398111 |
|---|
| Product | high-affinity nickel-transporter |
|---|
| Protein accession | YP_002282886 |
|---|
| Protein GI | 209550969 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2215] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0166136 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGACGA AACGCCTGCC CCTCATCCTT TCCGCCGCCG CCATGACGCT CCTGACGGCG
GCAAGCCTTG CCTATGCGCA ATCGCCGCTC GGCATCGGCA CGGCGGAGCC GAGCTTCCAG
CCGACCGGAG GGCCGCTCGC GCCGCTTTTG CTCTATGTGA ATTACGAGCA GCAGGCCTTC
TACCGGGCGC TGACGGATGC CTTGAAGGCG ATGCGCCAGG ACCCGTGGCA GTTGGCCTCG
CTGATCGGCC TCTCCTTCGC CTATGGCGTC TTCCATGCCG CAGGCCCCGG TCACGGCAAG
GCGGTCATCT CCTCCTACAT GATCGCCAAC GAGATCGAGT TGAAGCGCGG CGTGGTGATT
TCCTTCATCT CGGCCTTCAT CCAGGGCGTG GTGGCGGTGG CGCTGGTCGG CGGCGCCTGG
CTGGTGCTGC GCGGCAGCGG CATCACCCTG ACGGCGGCGA CCCATGCGAT GGAGATCGCA
AGCTTCGTCA TGGTCATCCT GTTCGGAGGC TGGCTGCTGT TCCGCAAGCT GCGCTCGATG
GTGGGCAACA TGCCGCGCCG CCGACTGATG GCGACGTCAG CCGGTCCGGT CAGCATGATG
CTCGACTGGA AGGACAATGC CGCCGAACGC CAGGTCTCTG CCTTCAACGG CAAGGCGCAG
GCTGTGGAGT CCGGCCATAC CTTTGTTCCC GGCATGGCCT GCGAGACATG CGGCAATGCT
CATGTGCCGG ATCCCGCCCT GCTTGCCGGC GACAGGTTCA GCGCCCGCGA GGCCTGGTCG
GCGATCGTCG CCGTCGGCCT TCGCCCCTGC TCCGGCGCCT TGCTGGTCAT GACCTTCTCG
CTGCTGAACG GGCTCTATCT CGGCGGCGTG CTGTCGGTTG CCGCCATGTC GCTCGGCACC
GCGATCACCG TTTCGCTGCT CGCCACCCTT GCCGTCACCG CCAAGAGTGC CGCCGTCCGC
CTCTCCGGGC GCGGCTCGAC CGCCTCGGTC TGGATCGGCA ACGCCATCGA AATCCTCGGC
GCCGTGCTGG TTATCGTGAT GGGGGCCCTG CTGCTCGGGG CGTCGCTGCA GGGATAG
|
|---|
| Protein sequence | MLTKRLPLIL SAAAMTLLTA ASLAYAQSPL GIGTAEPSFQ PTGGPLAPLL LYVNYEQQAF
YRALTDALKA MRQDPWQLAS LIGLSFAYGV FHAAGPGHGK AVISSYMIAN EIELKRGVVI
SFISAFIQGV VAVALVGGAW LVLRGSGITL TAATHAMEIA SFVMVILFGG WLLFRKLRSM
VGNMPRRRLM ATSAGPVSMM LDWKDNAAER QVSAFNGKAQ AVESGHTFVP GMACETCGNA
HVPDPALLAG DRFSAREAWS AIVAVGLRPC SGALLVMTFS LLNGLYLGGV LSVAAMSLGT
AITVSLLATL AVTAKSAAVR LSGRGSTASV WIGNAIEILG AVLVIVMGAL LLGASLQG
|
|---|
| |