Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_3236 |
Symbol | |
ID | 6981989 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | + |
Start bp | 3324359 |
End bp | 3326332 |
Gene Length | 1974 bp |
Protein Length | 657 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643397953 |
Product | transketolase |
Protein accession | YP_002282729 |
Protein GI | 209550812 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0021] Transketolase |
TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.878812 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCTCTC CCGAACAACA TGACCGGATG GCGAATGCGA TCCGTTTTCT CGCCATGGAC GCCGTCGAAA AGGCGAACTC CGGCCACCCG GGCATGCCGA TGGGCATGGC CGATGTGGCA ACGGTCCTGT TCACCAAATA TCTGAAGTTC GATCCGAAGA AGCCGCATTG GCCGAACCGC GATCGCTTCG TGCTCTCGGC CGGCCATGGC TCGATGCTGC TTTATTCGCT GCTGTATTTG ACCGGCTATC CCGACATGAC GGTCGAGGAT CTAAAGCAGT TCCGCCAGCT CGGCTCGAAG ACCGCCGGCC ATCCTGAATA TGGTCACGCC ACCGGCATCG AAACGACCAC CGGCCCGCTC GGCCAGGGCA TTGCCAATTC CGTCGGCATG GCGATTGCCG AACGCAAGCT GCGCGAGGAG TTCGGCGCCG ATCTTCAGGA TCACTTTACC TATGCGATCT GCGGCGACGG CTGCCTGATG GAGGGTATCA GCCACGAAGC CATAGCGCTC GCCGGCCACC TGAAGCTCAA CAAGCTCGTT CTGTTCTGGG ATAACAACTC GATCACCATC GACGGCGCCG TATCTCTGTC GGATTCCACC GATCAGATCG CCCGCTTCAA GGCCGTTCAC TGGAACACGA TCGAGATCGA CGGTCACGAC CAGGCTGCCA TCGCCGCCGC GATCGACGCT GCCCACAAGT CCGACCGGCC GACCTTCATT GCCTGCAAGA CGATCATCGG CTTCGGCGCC CCCAACAAGC AGGGCACCCA TAAGGTTCAC GGCAACCCGC TCGGCGCCGA AGAAATCGCC GCCACCCGCA AGGCGCTGAA CTGGGAATCC GAACCCTTCG TCATCCCGTC GGACGTCCTG GACAGCTGGC GTGCAGCCGG CGCCCGCTCC GTCGATCTCG TCAACGCCTG GGAACAGGGT CTGGCCAAGG CTCCGGCCAA GGCCGAATTC ACCCGCCGTA TGGCAGGCGA GTTGCCGGAA GGCTTCGATG CCGCGATCAG CGCTTACAAG AAGAAGCTTG CCGAGACCAA GCCGACGGTT GCCACCCGCA AGGCTTCGGA AGACGCGCTC GAGGTCATCA ACGGCTTCCT GCCGGAAACG CTCGGCGGCT CCGCCGACCT GACGCCGTCG AACAACACCA AGACCAGCCA GATGCATTCG ATCACGCCGA CGGATTTCGC CGGCCGGTAC ATGCATTGGG GCATCCGCGA GCACGGCATG GCTTCTGCCA TGAACGGCAT TGCGCTGCAT GGCGGCCTCA TTCCCTATAG CGGCGGCTTC CTGATCTTCT CGGATTATTG CCGCCCGCCG ATCCGCCTCG CTGCGCTGAT GGGCATCCGC GTCATTCACG TCCTGACGCA TGACTCGATC GGCGTCGGCG AAGATGGTCC GACGCACCAG CCGGTCGAAC AGCTCGCCGG TCTGCGCGCC ATCCCGAACC TGATGGTCTT CCGTCCGGCC GACGCCACGG AAACGGCGGA ATGCTGGCAG ATCGCCGTCA AGACGCACAA CCGTCCTTCC GGCCTTGCGC TGACACGCCA GAACCTCACC GCGTCCCGCA CCGAATACAG CGAAAAGAAC CTCTGCGAAC AGGGCGCCTA TACGCTGGCC GGCAATGCCG ACGCCAAGGT GACGATCTTC GCCTCCGGCT CGGAAGTCGA AATCGCCGTT GCCGCCCGCG CAGCCCTTGA AGCCAAGGGT GTCACGGTGC GCGTCGTATC GGTTCCCTGC ACGGAACTGT TCTTCGAGCA GCCGGACGCC TACCGCAAGG AAATCCTTGG CAACTCGCCG GTCAAGATCG CCGTCGAAGC CGCCGTCCGC GAAGGCTGGG ATGCTTTCAT CGGACCGGAA GGCACTTTCA TCGGCATGAA GGGCTTCGGC GCTTCCGGCC CGGTGAAGGA CGTTTACAAG CATTTCGGCA TCACTGCCGA CGCCGTCGTT GCGGCCGCGG AAGCAAAGCT TTAA
|
Protein sequence | MTSPEQHDRM ANAIRFLAMD AVEKANSGHP GMPMGMADVA TVLFTKYLKF DPKKPHWPNR DRFVLSAGHG SMLLYSLLYL TGYPDMTVED LKQFRQLGSK TAGHPEYGHA TGIETTTGPL GQGIANSVGM AIAERKLREE FGADLQDHFT YAICGDGCLM EGISHEAIAL AGHLKLNKLV LFWDNNSITI DGAVSLSDST DQIARFKAVH WNTIEIDGHD QAAIAAAIDA AHKSDRPTFI ACKTIIGFGA PNKQGTHKVH GNPLGAEEIA ATRKALNWES EPFVIPSDVL DSWRAAGARS VDLVNAWEQG LAKAPAKAEF TRRMAGELPE GFDAAISAYK KKLAETKPTV ATRKASEDAL EVINGFLPET LGGSADLTPS NNTKTSQMHS ITPTDFAGRY MHWGIREHGM ASAMNGIALH GGLIPYSGGF LIFSDYCRPP IRLAALMGIR VIHVLTHDSI GVGEDGPTHQ PVEQLAGLRA IPNLMVFRPA DATETAECWQ IAVKTHNRPS GLALTRQNLT ASRTEYSEKN LCEQGAYTLA GNADAKVTIF ASGSEVEIAV AARAALEAKG VTVRVVSVPC TELFFEQPDA YRKEILGNSP VKIAVEAAVR EGWDAFIGPE GTFIGMKGFG ASGPVKDVYK HFGITADAVV AAAEAKL
|
| |