Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_3029 |
Symbol | |
ID | 6981774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | + |
Start bp | 3088014 |
End bp | 3089327 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643397739 |
Product | dihydropyrimidine dehydrogenase |
Protein accession | YP_002282522 |
Protein GI | 209550605 |
COG category | [C] Energy production and conversion [F] Nucleotide transport and metabolism |
COG ID | [COG0167] Dihydroorotate dehydrogenase [COG1144] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit |
TIGRFAM ID | [TIGR01037] dihydroorotate dehydrogenase (subfamily 1) family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00152592 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGATC TCCGCAATAA TTTCGTCGGC ATCAAGTCCC CGAACCCGTT CTGGCTGGCC TCTGCGCCGC CGACCGACAA GGCCTACAAC GTCGAGCGCG CCTTCAAGGC CGGCTGGGGC GGCGTGGTCT GGAAGACGCT CGGCGAGGAA GGCCCGCCCG TCGTCAACGT CAACGGCCCG CGCTACGGCG CGATCTTCGG CGCAGACCGC CGCCTGCTCG GCCTAAACAA TATCGAGCTC ATCACCGACC GCGACCTCTA CACCAATCTC AGGGAAATGA AGCAGGTCAA GATGAACTGG CCGGATCGGG CGCTGATCGC CTCGATCATG GTGCCCTGCG AGGAACAGGC CTGGAAGTCC ATCCTGCCAC TCGTCGAAGA GACCGGCGCC GACGGAGTCG AACTGAATTT CGGCTGTCCG CACGGCATGT CGGAGCGAGG GATGGGCTCA GCCGTCGGCC AGGTGCCGGA ATATATCGAA ATGGTCGTGC GCTGGTGCAA GCAATACACC CGTATGCCCA TCATCACCAA GCTGACGCCC AACATCACCG ACGTTCGCCG TCCTGCCCGC GCCGCCAAGG CCGGGGGCAC CGATGCCGTC TCGCTGATCA ACACGATCAA TTCGATCGTA TCCGTCGATC TCGACAACTT CGCCCCCAAC CCGACGGTCG GCGGCAAGGG CAGCCATGGC GGCTATTGCG GCCCGGCGGT CAAGCCGATC GCCCTCAACA TGGTGGCCGA GATCGCCCGA GATCCCGAAA CCTACGGCCT GCCGATCTCC GGCATCGGCG GCATCACCAC CTGGCGAGAC GCGGCTGAAT TCCTCGTTCT CGGCGCCGGC AACGTCCAGG TCTGCACGGC CGCGATGACC TACGGCTTCA AGATCGTGCA GGAGATGATT TCCGGCCTTT CCGACTGGAT GGACGAAAAA GGCCATCGCA GCCTCGACGA TATCACCGGC CGCGCCGTGC CCAACGTCAC CGACTGGCAG TATCTGAACC TCAACTACAT CGCCAAGGCA AAGATCGACC AGGATGCCTG CATCAAATGC GGCCGCTGCC ACATCGCCTG CGAGGACACC TCGCATCAGG CGATCACCAA CGTCGTCAAC GGCCTGCGCC ATTTCGAGGT GATCGAGGAG GAATGCGTCG GCTGCAATCT CTGCGTCAAC GTCTGCCCGG TCGAGAACTG CATCACCATG GAGCCGCTTG CCGCCGGCAC CCTCGACAAG CGCACCGGCC GCACCGTCGA CCCGAACTAC GCCAACTGGA CGACGCACCC GAACAACCCG ATGGCCCGCC AGGCGGCGGA GTGA
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Protein sequence | MADLRNNFVG IKSPNPFWLA SAPPTDKAYN VERAFKAGWG GVVWKTLGEE GPPVVNVNGP RYGAIFGADR RLLGLNNIEL ITDRDLYTNL REMKQVKMNW PDRALIASIM VPCEEQAWKS ILPLVEETGA DGVELNFGCP HGMSERGMGS AVGQVPEYIE MVVRWCKQYT RMPIITKLTP NITDVRRPAR AAKAGGTDAV SLINTINSIV SVDLDNFAPN PTVGGKGSHG GYCGPAVKPI ALNMVAEIAR DPETYGLPIS GIGGITTWRD AAEFLVLGAG NVQVCTAAMT YGFKIVQEMI SGLSDWMDEK GHRSLDDITG RAVPNVTDWQ YLNLNYIAKA KIDQDACIKC GRCHIACEDT SHQAITNVVN GLRHFEVIEE ECVGCNLCVN VCPVENCITM EPLAAGTLDK RTGRTVDPNY ANWTTHPNNP MARQAAE
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