Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_2370 |
Symbol | |
ID | 6981109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | + |
Start bp | 2429011 |
End bp | 2432829 |
Gene Length | 3819 bp |
Protein Length | 1272 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643397083 |
Product | TPR repeat-containing protein |
Protein accession | YP_002281871 |
Protein GI | 209549954 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0364694 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCTTGA CTTTTCCACT CTACACGGAC AAACGGGAAG TGGGGGATGG GGTCTCAGTC ATGCGGGGTT ATTCCAAGAA CATCTGTCGC GCGGGGATGG CGCTGTCGCT TGCTTTGCCC GGTTTCGCTC CGTCGGCAAT GGCCGAGCCG GTACAGCGTG CAACACCGGT CGCCGGTTCC GTCATCGCCC GCAAGACCGG CGAAGAGGTT CGCTTCATCG ATGTGTCGAA TTGGCGTGTC GTCGATATCA ACCAGGATCT CCTGACCGGC GACGTGCTGC GCACCAACGC CAACGGCCAG CTCGCCATCG TCTTTTCCGA TCACACCCAG GTTCGCCTCG GCCGCAATTC ATCGCTGCAG GTCAAGAAAA TGGCGGCAAG CGGCGACACG ACACTGGAGC TGCAATCGGG AACGATCTGG GCACGCGCCG AGCGCGGCGG CCAGGGCCTG ACGGTCGAGA CCCCTGCAGC CGCAGCCGCC ATCCGCGGCA CCGACTGGAC GATGACCGTC GAGGGCAGCA AAACCTCGAT GATCGTGCTC GAAGGCCGCG TGGCGCTCAG CAACTCGCAG GGCAGCGTCG AGGTGAACGA GGGCGAAGGC GCGGTCGCCA CCATCGGCCA GGCACCGCAC AAGCTGGTGA TCGTCACGCC CGACGACCGC GAGCAGATGC TGTTTTACCT GAACCTGCGC GACGGCTTCG GCCTGATGCC GACTTCGCCG CTGCCGGCAG GCCGGATGGC CGACGAGCGC CGCCGGCTGT TGGCTTTGCC GCCGGAGCGT CGCACCACCG AGGACTGGTT GGAGCTTGCC GAAGTGCAGA GCGCCTTCGA CGGCCGGCAG GTCGCCGCAG AGACGCTTCA GGAGGTTCGC CGGCGCAAGC TGACGACCCT CCAGAAGGCG CGCGTCGACT TGATCGATGC CACGATCGCC GGCGCCGAAA AACGCTACGA CGAAGCCGCA AGGCTGTTTG CCGCGGCACT GCCGCATCTC GATCCGGCCC GCCGGAACAT GGCGCAGTAT GGCGGCTACT TCGCCCGCTC GCTTGCCGAT CCAGCCCATG TCGAAAAGCC GCCATCATCG GCTGTCGGCC CCTATGGCGC GATCATGCAG GCCTATACGG CGGGTTTCCT CAAGAATCCC CGCGCCTCCG TCGACCTGAT CAAGGATGCC GAAAAGCGTT TTCCGGATGA CCCCACCCTT CCTGCGATCC GCGCCCAGCT GGCGCAGCTG ATCGATGACC GCGCCCAGAT GCAGGAGGCG GTGAACCGCG CGCTCTCGCT CGATCCCAAC CATCCGATCG CCCTTGCCGC ACGCGCCTCC TACAAGGCGA GCTACGAAAG CGATATCAAC GGGGCGCTCG CCGATCTGAA CCGTGCCATC GAACTTGCGC CGGGCGCTTC GGGATCGTTG AACTCGATGG GCCTGCTGCA GAGCGCCCGC GATGCCAATG GCGAGGCCGA GGCCGCCTTC CTGCGGGCGG TCGCTCTCGA TCCGCAGGAT CCCGTCCCCC ACGCCAACCT TGCCATCCTC TATCTCGACC AATCGCGCAT GAAGGAGGCC AAGCGCGAGA TCGATGCGGC GCTTGCCGCC GACCCCTCCT TCGACATCGC CCTCCTCGCC CGCGGCCGCT ATTACCTGCA GACCGGCGAG CGCGACAAGG CGCTGGAGGA CCTGCTGGCC GCCAGCACCG CCAATCCCGC CCATTCGCAA TCGCAGCTGA TGCTCGCCGC CGCCCATTAC GAAAAGGGCG ACCGCATCCC CTCCGAGCAA GCGGTCGACA ATGCCGACAG ACTCGATAAG AACGATCCGG TCATCTCCTC CTTCCGCACC GCCGTCGATA TCGACGATTA CGACGCCGAC GGCGCGATCC GCAACGCGCA GGAATTTCTC CGCCGCTCGC GCGCCCGCGG CGGCGACTAC AGCGCCCTTG GCGCCAATCA GGATGCCGGC TCGACGCTGA ACAACGCTTT TCGCCTGCAG GGCCTGGATG CCTGGGGCCG CTATTACGGG GACGCGGTCT TCAGTCCCTT CGAAGGCAGC GGCTATATCG ACCAGTCGAT CAAGGGCAGC ATCTTCCCTT ACGTCAACGC AACGAGCTTC AGCGACGACA ATGTCATCCA GAACCGTGGC AACGCATCGA GCTATTCATC CTTTATCCAG GGCTTGCTGC TTGATCCGCA CATGCTTTCC GGCCGCTCCC GTTCGGCAAC GCTGCTGCGC ACGCCGTTCA TCGAAGGCTC GCTGGGCGGC GGCATCAACA GCGTCGACGG CCATGTGAGG GGTATCGGCG AGGCTGAAAT CCAGGGTTTC TCGAACGAGA CGATCCCGCT CAGCTTCTAT GGCAACCTGA CCTGGGAAGA ACTGGCGCTC GATGGCGACT ATCGCGATTT CGGCGGCTTC CAGACCGACA ACAAGCTTAT CGGCGGCAAT GGCTATCTGA CGGCAACGGT GACGCCTGAC GATCGCGTGG TGGCCTATGT CAACCATGCC AAAAACGATG GAACGCTGAA CGCACTGACG CAAGGCTCGT CACTGACGGA CTTCCTCAAC CTCCTGGGCT TCGGGATTCC AACTGAAGTC TCTTCGGAAT ACAACTATCG GCGCAATATC ACCGAAACCA CCAATGCCGG CCTCGGCTGG AGCCATACCT TCGGCTACGA AAATATCTTG AACGGCGCCT TCCTCTATTC GGAAAGCAGG TCGCGGACGT CCACCTCTCT TCAGGTCGAC GATGCGCCGG TTCTCGGCCT GCGCGATCCC GACATTATTC CATTTTTGGA CGGGACCGAG GATCTGTCTT CAAAAACCTA TATCGGCGCG CTCAGCCATT CCATCGGCAG CGGACCGCTG ACGTGGCGGT ACGGCATCGA AGGCGGCTGG ATCGATGCCA GCACGACCAC CTCTTCTCGC CTGCATGAAC TCTTTCCGCG CGTCGTGATC ATCCCAGAGA CCACGACCGG CCCGGACACA TTCAGCAACC GCGTCAATAT CAGCCGCGCC TACATCGACG TGCTGCACGA GATTACACCC GATCTCAAGG GCGAATACGC TCTCTTCGGC ACGCATATGG AAGGCGACGG AGTCGACGTC AACCGCCTGG AACCACGTTT CGGCCTTGCC TGGACACCCG CCCAGAACCA TTGGCTGCGC GCCGCCTTCA TGCGCCAGAG CCTCGACACC GGCGTACCCA CTCTTGCCCC GATCGGCGTC CTCGGATTGC AGGCCAACCA ATATTCGATC GGCCTCGAGG GGTATGCCGA TACGGCGGCG CTGCAGTGGG ACGCCGAATG GACCGACCGG TTCTTCACCT CGGTCGAATA CCAGCACCAG GAGCTGCATG ATTTCTCGAT CGATTTTCCG CTGATCTCGC TTCCGGCGGC CGACAGCCTG CCGCTGTCGC GCGGCAGCAT CGACCGTGCC GCCGTCACCG CAAACCTGGC GCTCGGTGCC GGTTTCGGCC TTTCCGCCAC CTATGCCTAT ATGGAATCGG AGAACAAGGA CCCGCTCGAG CCGAATTACG GCGGCTCCCT GCCATTCATT CCCAAGAATT CGGGCCAGAT CGCGCTGACC TGGGTCAACG AAGCCAAGGT CAAGGCAACG ATTGCCGCCA ATTATGTCGG CGAGCGCGAC GGCGACGATC TCGGCACCAA GCTCGACGAT TACTGGAGCC TCGACGCCCA TTTGATCTGG GAACCGCTGG ACAAGCGCAT CGCGCTCGAG GCCGCCGCCT ATAACCTGCT CGACGAGGAC TTCGAGATTA CGCCCGGTGT GCCCGGCTGG GGCCGCGCCT TCAAGGGCAC GCTCAAAGTC CGCTTCTGA
|
Protein sequence | MRLTFPLYTD KREVGDGVSV MRGYSKNICR AGMALSLALP GFAPSAMAEP VQRATPVAGS VIARKTGEEV RFIDVSNWRV VDINQDLLTG DVLRTNANGQ LAIVFSDHTQ VRLGRNSSLQ VKKMAASGDT TLELQSGTIW ARAERGGQGL TVETPAAAAA IRGTDWTMTV EGSKTSMIVL EGRVALSNSQ GSVEVNEGEG AVATIGQAPH KLVIVTPDDR EQMLFYLNLR DGFGLMPTSP LPAGRMADER RRLLALPPER RTTEDWLELA EVQSAFDGRQ VAAETLQEVR RRKLTTLQKA RVDLIDATIA GAEKRYDEAA RLFAAALPHL DPARRNMAQY GGYFARSLAD PAHVEKPPSS AVGPYGAIMQ AYTAGFLKNP RASVDLIKDA EKRFPDDPTL PAIRAQLAQL IDDRAQMQEA VNRALSLDPN HPIALAARAS YKASYESDIN GALADLNRAI ELAPGASGSL NSMGLLQSAR DANGEAEAAF LRAVALDPQD PVPHANLAIL YLDQSRMKEA KREIDAALAA DPSFDIALLA RGRYYLQTGE RDKALEDLLA ASTANPAHSQ SQLMLAAAHY EKGDRIPSEQ AVDNADRLDK NDPVISSFRT AVDIDDYDAD GAIRNAQEFL RRSRARGGDY SALGANQDAG STLNNAFRLQ GLDAWGRYYG DAVFSPFEGS GYIDQSIKGS IFPYVNATSF SDDNVIQNRG NASSYSSFIQ GLLLDPHMLS GRSRSATLLR TPFIEGSLGG GINSVDGHVR GIGEAEIQGF SNETIPLSFY GNLTWEELAL DGDYRDFGGF QTDNKLIGGN GYLTATVTPD DRVVAYVNHA KNDGTLNALT QGSSLTDFLN LLGFGIPTEV SSEYNYRRNI TETTNAGLGW SHTFGYENIL NGAFLYSESR SRTSTSLQVD DAPVLGLRDP DIIPFLDGTE DLSSKTYIGA LSHSIGSGPL TWRYGIEGGW IDASTTTSSR LHELFPRVVI IPETTTGPDT FSNRVNISRA YIDVLHEITP DLKGEYALFG THMEGDGVDV NRLEPRFGLA WTPAQNHWLR AAFMRQSLDT GVPTLAPIGV LGLQANQYSI GLEGYADTAA LQWDAEWTDR FFTSVEYQHQ ELHDFSIDFP LISLPAADSL PLSRGSIDRA AVTANLALGA GFGLSATYAY MESENKDPLE PNYGGSLPFI PKNSGQIALT WVNEAKVKAT IAANYVGERD GDDLGTKLDD YWSLDAHLIW EPLDKRIALE AAAYNLLDED FEITPGVPGW GRAFKGTLKV RF
|
| |